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Detailed information on CNT30477141


BLAST search results

BLAST vs Swiss-Prot:
sp|Q944G9|ALFP2_ARATH, E-value = 4e-55

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30631336Arabidopsis halleriVigna unguiculata36.0341.3583.6798forward
CNT30586190Arabidopsis halleriMusa acuminata35.6637.683.5197forward
CNT3017878Arabidopsis halleriZea mays68.3826.9280.65186forward
CNT30367502Arabidopsis halleriSorghum bicolor64.7127.880.11176forward
CNT3036858Arabidopsis halleriCucumis melo42.6520.3581.9116forward
CNT30104230Arabidopsis halleriOryza rufipogon46.325.1280.95126forward
CNT30117954Arabidopsis halleriOryza nivara46.329.180.95126forward
CNT30557185Arabidopsis halleriPanicum hallii64.7127.6779.55176forward
CNT30551796Arabidopsis halleriOryza brachyantha40.4414.0585.45110forward

Expression of CNT30477141

Peptides detected in this lncRNA

>peptide 1 (32 aa)
LVNFDTRDNVLLDEDVDHFLPFGGRLIQSLLK*

Sequence

>CNT30477141
CCTTGTCAACTTTGATACCAGGGACAATGTTCTGCTCGACGAGGACGTCGACCATTTTCTTCCCTTCGGTGGTAGACTGATACAAAGTCTCCTCAAATAG
GATTGCGCCGGAGATGTACTGTCCCAGTCCAGGTGCAGAGACCAACAAAGTCCGGAAAGCTTGACGGTTTGCCTCAGTGTTCTCTAGCCCTATCGAATCC
AAACGTTTCCCGCAAGTCGCGTTCGACTCGTCTATCGCCAAGATTCCACGTCCCGGAGACGCAATAGTTTTC