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Detailed information on CNT3047482


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30533125Prunus dulcisEucalyptus grandis19.5724.6283.59128forward

Expression of CNT3047482

Peptides detected in this lncRNA

>peptide 1 (68 aa)
MISERETRHDNRAQISSETFSRINFNFPEKIQKCFLFHFYKFNYQTRTIFAALTTGFSLAMASRPAAL*

>peptide 2 (44 aa)
MIIEHKFPPKLSRELILIFPRKFRNVFCFISTNLIIKPGRSSRP*

>peptide 3 (33 aa)
MLLVEGLPVTPQLLTQCVRVSGTLNSVSSFSAL*

>peptide 4 (34 aa)
IIIRENLIFFNNEAISLSVVSSAPKTVSLNLNHR*

Sequence

>CNT3047482
ATAATTATCAGAGAGAATTTGATTTTCTTCAATAACGAAGCGATCTCTCTCTCCGTCGTCTCTTCTGCTCCTAAAACTGTTTCCCTCAATCTAAACCATC
GGTGATGATCTCCGAGAGAGAGACGCGCCATGATAATCGAGCACAAATTTCCTCCGAAACTTTCTCGAGAATTAATTTTAATTTTCCCGAGAAAATTCAG
AAATGTTTTTTGTTTCATTTCTACAAATTTAATTATCAAACCCGGACGATCTTCGCGGCCTTGACCACGGGGTTTTCTCTCGCGATGGCCTCGCGACCCG
CGGCCTTGTAGTCGTAGCTGCACACGTGGCGGTCGGAGTACCGGCGTTGAAGCACTTCTGGCACATGTTGTTGGTGGAGGGATTGCCTGTGACGCCGCAG
TTGTTGACGCAGTGCGTTAGAGTTTCGGGGACCTTGAACTCCGTCTCTTCCTTCTCCGCTCTCTGAGCCATTTTTTTCATTCAGATTCCTTCCGATCGAT
CGATCTATCTCTCCTCTTCTCTTCTCTGATTTTTTTTCTTTTTCTTGAGATATAGATAGAAAGTATATGGAGGTTGAGGTTTTCTAGAGAGAGAAAAAGA
AAGTTGTGGTTTCTAGAGAGAGGGAGAGAAGAGAGAGGTTTGAGAGGTTTGGGT