« Back to Prunus dulcis search


Detailed information on CNT3047443


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9AT55|METK2_ELAUM, E-value = 0.0

BLAST vs NONCODE:
NONPOPT000587, E-value = 3e-71

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30520776Prunus dulcisSetaria italica40.9972.6681.8489forward
CNT30641080Prunus dulcisNymphaea colorata16.3521.7986.15195forward
CNT30549537Prunus dulcisIpomoea triloba28.5851.286.22341forward
CNT30515028Prunus dulcisJuglans regia54.6576.885.74652forward
CNT30373104Prunus dulcisArabidopsis thaliana18.4426.2285.91220forward
CNT30266655Prunus dulcisChenopodium quinoa22.5523.9386.25269forward
CNT30729048Prunus dulcisCorchorus capsularis22.8841.6284.98273forward
CNT30381524Prunus dulcisManihot esculenta27.8340.1583.73332forward
CNT30402638Prunus dulcisBeta vulgaris31.629.4388.59377forward
CNT30524774Prunus dulcisPhaseolus vulgaris28.4246.7682.6339forward
CNT30628634Prunus dulcisVigna unguiculata30.0149.7285.75358forward
CNT30194995Prunus dulcisPisum sativum23.4729.4182.86280forward
CNT30490001Prunus dulcisOlea europaea21.8852.6287.36261forward
CNT30711739Prunus dulcisGlycine max50.0449.8785.59597forward
CNT30638840Prunus dulcisCapsicum annuum28.3339.5880.77338forward
CNT3090332Prunus dulcisSolanum tuberosum18.2733.5487.16218forward
CNT30188757Prunus dulcisSecale cereale30.3481.7282.32362forward
CNT30225701Prunus dulcisHordeum vulgare17.641.2681.9210forward
CNT30389985Prunus dulcisTriticum turgidum18.8622.1284225forward
CNT30561874Prunus dulcisActinidia chinensis32.3643.7683.42386forward
CNT3086110Prunus dulcisVigna radiata22.5524.0683.64269forward
CNT30508528Prunus dulcisSolanum lycopersicum21.2148.7582.61253forward
CNT30172560Prunus dulcisTrifolium pratense18.0231.5786.05215forward
CNT30144304Prunus dulcisMedicago truncatula23.0542.7785.09275forward
CNT30441436Prunus dulcisAegilops tauschii13.9132.7486.75166forward
CNT30662024Prunus dulcisTriticum dicoccoides26.7462.884.33319forward
CNT30310308Prunus dulcisCamelina sativa14.8476.6281.92177forward
CNT3059692Prunus dulcisArabidopsis lyrata7.7131.8383.792forward
CNT30471855Prunus dulcisSaccharum spontaneum21.8828.3785.44261forward
CNT3013982Prunus dulcisZea mays19.0378.2886.34227forward
CNT30606743Prunus dulcisGossypium raimondii29.5132.9686.36352forward
CNT30218668Prunus dulcisKalanchoe fedtschenkoi20.763.8282.59247forward
CNT3066706Prunus dulcisLeersia perrieri10.7337.6587.5128forward
CNT30212612Prunus dulcisHelianthus annuus10.9854.3683.21131forward
CNT30626924Prunus dulcisDaucus carota28.6727.1282.46342forward
CNT30349162Prunus dulcisEragrostis tef17.7723.2788.21212forward
CNT30367875Prunus dulcisSorghum bicolor16.9324.4387.62202forward
CNT30620812Prunus dulcisCajanus cajan27.6626.5788.18330forward
CNT30597062Prunus dulcisOryza meridionalis21.8823.7385.06261forward
CNT30432398Prunus dulcisPapaver somniferum29.0928.5883.29347forward
CNT30570674Prunus dulcisVitis vinifera27.5834.8586.63329forward
CNT3055164Prunus dulcisAmborella trichopoda29.3430.4384.86350forward
CNT3022562Prunus dulcisPopulus trichocarpa30.3423.1585.64362forward
CNT3035650Prunus dulcisCucumis melo22.5519.9688.85269forward
CNT30148817Prunus dulcisBrachypodium distachyon21.8822.5885.44261forward
CNT30101810Prunus dulcisOryza rufipogon21.8810.385.06261forward
CNT30496713Prunus dulcisDigitaria exilis20.2816.0779.34242forward
CNT30116702Prunus dulcisOryza nivara21.8825.4184.67261forward
CNT30174546Prunus dulcisVigna angularis30.8548.184.78368forward
CNT30551132Prunus dulcisOryza brachyantha8.1325.1384.5497forward
CNT30113329Prunus dulcisFicus carica18.6920.7185.2223forward
CNT30725315Prunus dulcisLupinus angustifolius29.3434.7985.43350forward

Expression of CNT3047443

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MKLAQCTSWQVHWPQCSWQPASQCRPHSCPP*

>peptide 2 (39 aa)
MEDGLLIKVLLRDHRLDHMLLEISSNLIVCHSLVVLGRN*

>peptide 3 (47 aa)
MWPWSPAPISSGLCCSMFTRTLQLSASRPTSSDTKPIVRHVSRTIFS*

>peptide 4 (48 aa)
MAEGHELRGLISGIAKHVALVTSTNLFRALLLNVHKNLAIVSIKTNIV*

>peptide 5 (63 aa)
MTNRPDGLRWKMVFSSRYFSGITGLITCSLRSAAISSFVTVSSCWVEIRTVWTRIGTMAPLSL*

>peptide 6 (30 aa)
MTMLVLVQVSQATLLSGSCARQASSTASEI*

Sequence

>CNT3047443
TAATAAACTAATACATCCTTGAAAGAACTCAAAAAATACAAATCATTAATAAAAATAAAAATAACTAAACAAAAACCCAAATGGCAAATTGCCTGTATAG
AGAGCAACAGCAGCACATGCTCAAATTAATTCAATGTTGATGAAGGGCCTTCTTCATTCAGAGAGAGAGAGCTTCAAGCTTGGACCTTGTCCCATTTGAG
TGGCTTGACCACCTCCCATGTGAAGTCAGTGTCATCCCTGCCAAAATGCCCATAGGCAGCAGTCTTCAAAAACCTTCCATTGCCACCCCTCTTGAGATCT
AGGTTGATGGCAATCATACCAGGCCTGAAATCAAAGCTCTCTTTCACAATCTTGAGAATTTCCTTGTCTGGGATCTTCCCAGTGCCATAAGAATCAACAA
AAACAGACAAAGGCTCAGGCACACCAATGGCATATGAAACTTGCACAATGCACCTCCTGGCAAGTCCACTGGCCACAATGCTCTTGGCAGCCTGCCTCAC
AATGTAGGCCCCACTCCTGTCCACCTTAGTTGGGCCCTCCGATGACGAATCGGCCAGATGGGTTGAGATGGAAGATGGTCTTCTCATCAAGGTACTTCTC
AGGGATCACAGGCTTGATCACATGCTCCTTGAGATCAGCAGCAATCTCATCGTTTGTCACAGTCTCGTCGTGCTGGGTCGAAATTAGGACAGTGTGGACA
CGAATTGGAACCATGGCACCCTTGTCATTGTAGTACTCAACAGTCACTTGGGTCTTGCCATCAGGCCTCAACCAAGCACAAGTACCATTCTTGCGAACCT
CGGTGAGCTTAGCACCGAGCTTGGTTGCAAGGACATGGCTGAGGGGCATGAGCTCAGGGGTCTCATCAGTGGCATAGCCAAACATGTGGCCTTGGTCACC
AGCACCAATCTCTTCAGGGCTCTGCTGCTCAATGTTCACAAGAACCTTGCAATTGTCAGCATCAAGACCAACATCGTCTGATACAAAGCCAATTGTACGG
CATGTGTCACGAACAATCTTCTCATAGTCTACATTGGCCTTGGTGGTGATCTCTCCGAAGACCATGACCATGTTGGTCTTGGTGCAGGTTTCACAGGCCA
CCTTGCTCTCAGGGTCCTGTGCAAGGCAGGCATCGAGCACTGCGTCTGAGATCTGATCACAGAGCTTGTCTGGGTGACCCTCATTGACTGATT