Detailed information on CNT30473478


BLAST search results

BLAST vs Swiss-Prot:
sp|P19656|NLTP_MAIZE, E-value = 6e-38

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30222607Saccharum spontaneumHordeum vulgare24.1715.690.251forward
CNT30389829Saccharum spontaneumTriticum turgidum23.789050forward
CNT30591965Saccharum spontaneumMusa acuminata25.125.5692.4553forward

Expression of CNT30473478

Peptides detected in this lncRNA

>peptide 1 (69 aa)
GAVGGGADGVRDADAALGGDAGGVAGVEAPDAAAAARGGRGALAAGVGQAGRDGRAHLPAADGGLRGRRE

Sequence

>CNT30473478
TGGAGCAGTCGGTGGAGGTGCTGATGGTGTAAGGGACGCTGACGCCGCACTTGGAGGGGATGCTGGCGGCGTTGCCGGCGTTGAGGCTCCTGACGCCGCT
GCAGCAGCCCGCGGAGGGCGCGGAGCCCTGGCCGCGGGCGTAGGACAGGCAGGGCGCGATGGCCGAGCTCACCTGCCCGCAGCTGATGGCGGCCTCCGAG
GTCGCCGCGAG