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Detailed information on CNT30473301


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3014249Saccharum spontaneumZea mays54.5946.9987.2125forward

Expression of CNT30473301

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MNFSLHFLLFCPIVFTRYDATDETAQSPRIDSMGQAPLGT*

>peptide 2 (40 aa)
MTLLMKLHKVHGLTAWVRRPWVHSRRLERNTTKRKKRIVLI

Sequence

>CNT30473301
AGGCGATTGCCAGACAGACAAATTCATACTCGTCCCACACAAAACCATAAAGGATGAACTTTAGTTTACACTTCCTCTTATTTTGCCCAATTGTATTCAC
AAGATATGACGCTACTGATGAAACTGCACAAAGTCCACGGATTGACAGCATGGGTCAGGCGCCCTTGGGTACATAGCAGGAGACTGGAAAGAAATACAAC
CAAAAGAAAGAAACGAATAGTGCTAATCC