Detailed information on CNT30472715


BLAST search results

BLAST vs Swiss-Prot:
sp|P01053|ICI2_HORVU, E-value = 3e-18

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697776Saccharum spontaneumOryza sativa40.5419.3588.8990reverse complement

Expression of CNT30472715

Peptides detected in this lncRNA

>peptide 1 (72 aa)
SSTDLAIRSSRPQTTMSSTTAAPECGGAKTSWPDLVGLSVEEAKKVILKDKPDADIVVLPVGSPVTRDYRPDR

Sequence

>CNT30472715
CATCATCAACTGATCTAGCTATTCGCAGTTCGCGACCGCAGACGACCATGAGCTCCACGACGGCGGCACCGGAGTGCGGCGGCGCTAAGACGTCGTGGCC
GGATTTGGTGGGGCTCAGCGTGGAGGAAGCCAAGAAGGTGATCCTCAAGGACAAGCCCGACGCGGACATCGTCGTGCTGCCCGTCGGCTCGCCTGTGACC
AGGGATTATCGCCCCGACCGCG