Detailed information on CNT3047217


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30318007Prunus dulcisCorylus avellana60.2161.3294.772143reverse complement
CNT30588049Prunus dulcisMusa acuminata46.5977.5591.191658forward
CNT30544747Prunus dulcisBrassica napus52.9473.5792.891884reverse complement
CNT30445720Prunus dulcisSaccharum spontaneum45.7476.5491.831628reverse complement

Expression of CNT3047217

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MNGLTRFPLSLSTIQRNHSQGNGLCRISGERRPR*

>peptide 2 (35 aa)
MRPFRPDVERSQVGPPTGSGRADRCDYRGAPKPGC*

>peptide 3 (49 aa)
MGAGRCAPSGRMWNGHKSVRRRVRGALTDAIIAARQSPAVDMPARRRRR*

>peptide 4 (93 aa)
MMASRAPRLAVGINTKSSATHATTIGGCETSVARRVRSSRIEGSKKCSAPARVSTRPQVRGGYPLNLSISISGGKETYKDSPSNGERTGNSPA*

>peptide 5 (90 aa)
MASELWSGEASSAADRAQVHWKVAPERVRAPLCPDPVAPRGAVGESGCLGMQPQSGGKFCPRLNTGERPIANKYREGKMKRTLKRESKSA*

>peptide 6 (85 aa)
MEQCRQGKSAKWIRNLGKRIGSEGWARGFQSRTRRLSVDCSSCSRGESGSPRAVRGTDWERSFGDFPRASNSRLRTGTDKGNPTV*

>peptide 7 (55 aa)
MPRHLISDAHEWINEIPTVPVYYPAKPQPRERALQNQRGKKTPLSLTLVRLCEMT*

>peptide 8 (36 aa)
MLGSGSGFNATPGQGGLPAEFKHINKRRKRNLQGFP*

>peptide 9 (30 aa)
MESRARGPFFGKRIGDAGMNRSRVTVPNQG*

>peptide 10 (30 aa)
MCASQRAIKPVRRKEADWRDPLEGWTVDRP*

>peptide 11 (30 aa)
MKNVAKCDTWCELQNPVNHRVFERKLRRSH*

Sequence

>CNT3047217
ATATGTAAAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAA
CCATCGAGTCTTTGAACGCAAGTTGCGCCGAAGCCATTAGGCCGAGGGCACGCCTGCCTGGGCGTCACACGTCGTTGCCCCCCCATCAACTCCTTCGGGA
TTGCGGGGGGCGGATGATGGCCTCCCGTGCGCCTCGCCTCGCTGTTGGCATAAATACCAAGTCCTCGGCGACGCACGCCACGACAATCGGTGGTTGCGAG
ACCTCGGTTGCCCGTCGTGTGCGTTCGTCGCGCATCGAGGGCTCGAAAAAATGCTCGGCTCCGGCTCGGGTTTCAACGCGACCCCAGGTCAGGGGGGGTT
ACCCGCTGAATTTAAGCATATCAATAAGCGGAGGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGCTTGAGAATC
GGGCGCCCATGGCGTCCGAATTGTGGTCTGGAGAAGCGTCCTCAGCGGCGGACCGGGCCCAAGTCCACTGGAAGGTGGCGCCGGAGAGGGTGAGAGCCCC
GTTGTGCCCGGACCCTGTCGCACCACGAGGCGCTGTCGGCGAGTCGGGTTGTTTGGGAATGCAGCCTCAATCGGGCGGTAAATTCTGTCCAAGGCTAAAT
ACGGGCGAGAGACCGATAGCAAACAAGTACCGCGAGGGAAAGATGAAAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGAGGGAAGCGG
ATGGGGGCCGGGCGATGCGCCCCTTCCGGCCGGATGTGGAACGGTCACAAGTCGGTCCGCCGACGGGTTCGGGGCGCGCTGACCGATGCGATTATCGCGG
CGCGCCAAAGCCCGGCTGTTGATATGCCCGCGAGACGCCGCCGACGCTGATCGGTAGGTAGGCAAAGACGCTGCCGCCTCCTCGGCGCGTTTCAGGCATC
TGCGCGTTCTCGCATCGGCCTGGTGGGTTTCATTCGGCCCGTTTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGCGATTAAACCCG
TAAGGCGTAAGGAAGCTGACTGGCGGGATCCCCTTGAGGGTTGGACCGTCGACCGACCTTGATCTTCTGAGAAGGGTTCGAGTGAGAGCATGCCTGTCGG
GACCCGAAAGATGGTGGACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATACTGACGTGCAAATCGCTCGTCTGACTT
GGGTATAGGGGCGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGAGCCCGTGAACGAGTTCTATCAGGTAA
AGCCAATGATTAGAGGCATCGGGGGCAACGCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGCGCTGCTTTTTGTTGAGCCGCTACATGGAATCG
AGAGCCCGCGGGCCATTTTTTGGTAAGCGAATCGGCGATGCGGGGATGAACCGAAGCCGGGTTACGGTGCCCAATCAAGGCTAACCTAGAACCCACAAAG
GGTGTTGGTCGATTAAGACAAAGCAGATCGGTGGTCATGGAAGTCGAACCGCTAAGGAGTGTGTAACAACTCACCGGCCGAATCAACTAGCCCCGAAATG
GATGGCGCTTAAGCGCGCGACCTATACCCGGCCGTCGGGGCAAGTGCCAGGCCCCGATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCTGGGGCGTGA
GCCCGGGCGGAGCGGCCGCCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGG
CACTTGCACATGGGTTAGTCGATCCGAAGAGACGGGGGAAGCCCATCAGATAGCGCGTCTCGCGCGAACTTCGAAAGGGAATCGGGTTAAAATTCCTAAA
CCGGGACGTGGTGGTTGACGGCAAGGTTAGGGAGTCCGGAGACGTCGGCGGGGGCCTCGGGAAGAGTTATCTTTTCTGTTTAACAGCCTGCCCACCCTGG
AAACGGCTCAGCCGGAGGTAGGGTCCAGCCGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCCGGCGACCCTTGAAAATCCGGAGGACCG
AGTGCCATTCACGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACATCCTCTGGTCGATGGAACAATGTAGGCAAGGGAAGTCGGCAAAAT
GGATCCGTAACCTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCACGGGGGTTCCAGTCCCGAACCCGTCGGCTGTCGGTGGACTGCTCGAGCTGCTCCCG
CGGCGAGAGCGGGTCGCCGCGTGCCGTCCGGGGGACGGACTGGGAGCGTTCCTTCGGGGACTTTCCCCGGGCGTCGAACAGCCGCCTCAGAACTGGTACT
GACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCCTGCGGATGCTAACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAG
TGAAGAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAACTATGGCTCTCTTAAGGTAGCCAAATGCCTCGCCATCTAATTAGTGACGCGCATGAATGG
ATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTTGCAGAATCAGCGGGGAAAGAAGACCCCGTTGAGCT
TGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGTATAAGTGGGAGCTTCGGCGAAATTGAAATACCACTACTTTTAACGTTATTTTACTTAT
TCCGCGAAACGGAGGCGGGGCATCGCCCCTCTTTTTGGACCCAAGGCCGGCCTCGCGCCGGCCGATCCGGGCGGAAGACATTGTCAGGTGGGGAGTTTGG
CTGGTGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGGGGAACAAAAGGGTAAAAGCTCGTTTGA
TTCTGATTTCCAGTACGAATACGAACCGTGAAAGCGCGGCCTATCGATCCTTTAGACCTTCGGAATTTGAAGCTAGAGGTGTCAGAAAAGTTACCACAGG
GATAACTGGCTTGTGGCAGCCCAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCACCAAGTGT
TGGATTGTTCACCCACCAATAGGGGACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGACAGTGTCGCAATAGTAATTCA
ACCTAGTACGAGAGGAAACGTTGATTCGCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGCGCTGGATTATGACTGAACG
CCTCTAAGTCAGAATCCGGGCTAAAAGCGACGCATTCGCCCGCCGCCCGTTTGCCGACC