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Detailed information on CNT3047210


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639835Prunus dulcisNymphaea colorata79.376.2491.962551reverse complement
CNT30531232Prunus dulcisEucalyptus grandis79.1775.294.272547forward
CNT30550233Prunus dulcisIpomoea triloba52.6660.0995.931694forward
CNT30519180Prunus dulcisJuglans regia79.1176.9695.212545forward
CNT30283199Prunus dulcisChenopodium quinoa77.9692.1794.422508forward
CNT3021656Prunus dulcisCitrullus lanatus79.1442.0595.212546forward
CNT30632327Prunus dulcisVigna unguiculata78.3378.5594.442520forward
CNT30195048Prunus dulcisPisum sativum78.867.494.082535forward
CNT30508033Prunus dulcisNicotiana attenuata77.7475.1193.122501forward
CNT30163337Prunus dulcisPistacia vera43.0210093.711384forward
CNT30383013Prunus dulcisTriticum turgidum77.7494.2490.882501forward
CNT30311297Prunus dulcisCamelina sativa56.7990.7194.031827forward
CNT3060563Prunus dulcisArabidopsis lyrata62.5491.8394.932012reverse complement
CNT3076930Prunus dulcisBrassica juncea79.0874.0493.552544forward
CNT30210115Prunus dulcisHelianthus annuus73.8933.3789.022377forward
CNT30433917Prunus dulcisPapaver somniferum79.3393.6293.612552forward
CNT30574469Prunus dulcisVitis vinifera38.2767.1696.181231forward
CNT3023562Prunus dulcisPopulus trichocarpa62.5790.1995.432013reverse complement
CNT3037170Prunus dulcisCucumis melo78.3653.3795.22521forward
CNT30583181Prunus dulcisEchinochloa crusgalli72.899.9191.842342forward
CNT30335982Prunus dulcisCynara cardunculus79.5577.9788.672559reverse complement

Expression of CNT3047210

Peptides detected in this lncRNA

>peptide 1 (38 aa)
EKMLGSGSGFNATPGQGGLPAEFKHINKRRKRNLQGFP*

>peptide 2 (35 aa)
MRPFRPDVERSQVGPPTGSGRADRCDYRGAPKPGC*

>peptide 3 (30 aa)
MCASQRAIKPVRRKEADWRDPLEGWTVDRP*

>peptide 4 (55 aa)
MPRHLISDAHEWINEIPTVPVYYPAKPQPRERALQNQRGKKTPLSLTLVRLCEMT*

>peptide 5 (90 aa)
MASELWSGEASSAADRAQVHWKVAPERVRAPLCPDPVAPRGAVGESGCLGMQPQSGGKFCPRLNTGERPIANKYREGKMKRTLKRESKSA*

>peptide 6 (50 aa)
SKKCSAPARVSTRPQVRGGYPLNLSISISGGKETYKDSPSNGERTGNSPA*

>peptide 7 (49 aa)
MGAGRCAPSGRMWNGHKSVRRRVRGALTDAIIAARQSPAVDMPARRRRR*

>peptide 8 (34 aa)
MNGLTRFPLSLSTIQRNHSQGNGLCRISGERRPR*

>peptide 9 (30 aa)
MESRARGPFFGKRIGDAGMNRSRVTVPNQG*

>peptide 10 (85 aa)
MEQCRQGKSAKWIRNLGKRIGSEGWARGFQSRTRRLSVDCSSCSRGESGSPRAVRGTDWERSFGDFPRASNSRLRTGTDKGNPTV*

Sequence

>CNT3047210
TCGAAAAAATGCTCGGCTCCGGCTCGGGTTTCAACGCGACCCCAGGTCAGGGGGGGTTACCCGCTGAATTTAAGCATATCAATAAGCGGAGGAAAAGAAA
CTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGCTTGAGAATCGGGCGCCCATGGCGTCCGAATTGTGGTCTGGAGAAGCGTCCT
CAGCGGCGGACCGGGCCCAAGTCCACTGGAAGGTGGCGCCGGAGAGGGTGAGAGCCCCGTTGTGCCCGGACCCTGTCGCACCACGAGGCGCTGTCGGCGA
GTCGGGTTGTTTGGGAATGCAGCCTCAATCGGGCGGTAAATTCTGTCCAAGGCTAAATACGGGCGAGAGACCGATAGCAAACAAGTACCGCGAGGGAAAG
ATGAAAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGAGGGAAGCGGATGGGGGCCGGGCGATGCGCCCCTTCCGGCCGGATGTGGAAC
GGTCACAAGTCGGTCCGCCGACGGGTTCGGGGCGCGCTGACCGATGCGATTATCGCGGCGCGCCAAAGCCCGGCTGTTGATATGCCCGCGAGACGCCGCC
GACGCTGATCGGTAGGTAGGCAAAGACGCTGCCGCCTCCTCGGCGCGTTTCAGGCATCTGCGCGTTCTCGCATCGGCCTGGTGGGTTTCATTCGGCCCGT
TTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGCGATTAAACCCGTAAGGCGTAAGGAAGCTGACTGGCGGGATCCCCTTGAGGGTT
GGACCGTCGACCGACCTTGATCTTCTGAGAAGGGTTCGAGTGAGAGCATGCCTGTCGGGACCCGAAAGATGGTGGACTATGCCTGAGCGGGGCGAAGCCA
GAGGAAACTCTGGTGGAGGCCCGCAGCGATACTGACGTGCAAATCGCTCGTCTGACTTGGGTATAGGGGCGAAAGACTAATCGAACCGTCTAGTAGCTGG
TTCCCTCCGAAGTTTCCCTCAGGATAGCTGGAGCCCGTGAACGAGTTCTATCAGGTAAAGCCAATGATTAGAGGCATCGGGGGCAACGCCTCGACCTATT
CTCAAACTTTAAATAGGTAGGACGGCGCTGCTTTTTGTTGAGCCGCTACATGGAATCGAGAGCCCGCGGGCCATTTTTTGGTAAGCGAATCGGCGATGCG
GGGATGAACCGAAGCCGGGTTACGGTGCCCAATCAAGGCTAACCTAGAACCCACAAAGGGTGTTGGTCGATTAAGACAAAGCAGATCGGTGGTCATGGAA
GTCGAACCGCTAAGGAGTGTGTAACAACTCACCGGCCGAATCAACTAGCCCCGAAATGGATGGCGCTTAAGCGCGCGACCTATACCCGGCCGTCGGGGCA
AGTGCCAGGCCCCGATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCTGGGGCGTGAGCCCGGGCGGAGCGGCCGCCGGTGCAGATCTTGGTGGTAGTA
GCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTTAGTCGATCCGAAGAGACGGGGGAAGC
CCATCAGATAGCGCGTCTCGCGCGAACTTCGAAAGGGAATCGGGTTAAAATTCCTAAACCGGGACGTGGTGGTTGACGGCAAGGTTAGGGAGTCCGGAGA
CGTCGGCGGGGGCCTCGGGAAGAGTTATCTTTTCTGTTTAACAGCCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCCAGCCGCTGGAAGAGCA
CCGCACGTCGCGTGGTGTCCGGTGCGCCCCCGGCGACCCTTGAAAATCCGGAGGACCGAGTGCCATTCACGCCCGGTCGTACTCATAACCGCATCAGGTC
TCCAAGGTGAACATCCTCTGGTCGATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTCTGAGGGCTGGG
CACGGGGGTTCCAGTCCCGAACCCGTCGGCTGTCGGTGGACTGCTCGAGCTGCTCCCGCGGCGAGAGCGGGTCGCCGCGTGCCGTCCGGGGGACGGACTG
GGAGCGTTCCTTCGGGGACTTTCCCCGGGCGTCGAACAGCCGCCTCAGAACTGGTACTGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCG
ATGGTCCCTGCGGATGCTAACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAACT
ATGGCTCTCTTAAGGTAGCCAAATGCCTCGCCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAA
CCACAGCCAAGGGAACGGGCTTTGCAGAATCAGCGGGGAAAGAAGACCCCGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGT
ATAAGTGGGAGCTTCGGCGAAATTGAAATACCACTACTTTTAACGTTATTTTACTTATTCCGCGAAACGGAGGCGGGGCATCGCCCCTCTTTTTGGACCC
AAGGCCGGCCTCGCGCCGGCCGATCCGGGCGGAAGACATTGTCAGGTGGGGAGTTTGGCTGGTGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAA
GATGAGCTCAACGAGAACAGAAATCTCGTGGGGAACAAAAGGGTAAAAGCTCGTTTGATTCTGATTTCCAGTACGAATACGAACCGTGAAAGCGCGGCCT
ATCGATCCTTTAGACCTTCGGAATTTGAAGCTAGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGCTCATAGCGACGTTGC
TTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCACCAAGTGTTGGATTGTTCACCCACCAATAGGGAACGTGAGCTGGGTTTAG
ACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGACAGTGTCGCAATAGTAATTCAACCTAGTACGAGAGGAAACGTTGATTCGCACAATTGGTCATC
GCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGCGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTAAAAGCGACGCATTCGCCCG
CCGCCCGTTTGCCGACC