CANTATAdb - search

Detailed information on CNT3047202

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30519021	Prunus dulcis	Juglans regia	91.57	88.85	95.53	1880	forward
CNT30194621	Prunus dulcis	Pisum sativum	100.34	73.76	94.47	2060	forward

Expression of CNT3047202

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MNGLTRFPLSLSTIQRNHSQGNGLCRISGERRPR*

>peptide 2 (37 aa)
AKECVTTHRPNQLAPKWMALKRATYTRPSGQVPGPDE*

>peptide 3 (85 aa)
MEQCRQGKSAKWIRNLGKRIGSEGWARGFQSRTRRLSVDCSSCSRGESGSPRAVRGTDWERSFGDFPRASNSRLRTGTDKGNPTV*

>peptide 4 (55 aa)
MPRHLISDAHEWINEIPTVPVYYPAKPQPRERALQNQRGKKTPLSLTLVRLCEMT*

Sequence

>CNT3047202
CGCTAAGGAGTGTGTAACAACTCACCGGCCGAATCAACTAGCCCCGAAATGGATGGCGCTTAAGCGCGCGACCTATACCCGGCCGTCGGGGCAAGTGCCA
GGCCCCGATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCTGGGGCGTGAGCCCGGGCGGAGCGGCCGCCGGTGCAGATCTTGGTGGTAGTAGCAAATA
TTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTTAGTCGATCCGAAGAGACGGGGGAAGCCCATCAG
ATAGCGCGTCTCGCGCGAACTTCGAAAGGGAATCGGGTTAAAATTCCTAAACCGGGACGTGGTGGTTGACGGCAAGGTTAGGGAGTCCGGAGACGTCGGC
GGGGGCCTCGGGAAGAGTTATCTTTTCTGTTTAACAGCCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCCAGCCGCTGGAAGAGCACCGCACG
TCGCGTGGTGTCCGGTGCGCCCCCGGCGACCCTTGAAAATCCGGAGGACCGAGTGCCATTCACGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGG
TGAACATCCTCTGGTCGATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCACGGGG
GTTCCAGTCCCGAACCCGTCGGCTGTCGGTGGACTGCTCGAGCTGCTCCCGCGGCGAGAGCGGGTCGCCGCGTGCCGTCCGGGGGACGGACTGGGAGCGT
TCCTTCGGGGACTTTCCCCGGGCGTCGAACAGCCGCCTCAGAACTGGTACTGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCC
CTGCGGATGCTAACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAACTATGGCTC
TCTTAAGGTAGCCAAATGCCTCGCCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGC
CAAGGGAACGGGCTTTGCAGAATCAGCGGGGAAAGAAGACCCCGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGTATAAGTG
GGAGCTTCGGCGAAATTGAAATACCACTACTTTTAACGTTATTTTACTTATTCCGCGAAACGGAGGCGGGGCATCGCCCCTCTTTTTGGACCCAAGGCCG
GCCTCGCGCCGGCCGATCCGGGCGGAAGACATTGTCAGGTGTAGTATAAGTGGGAGCTTCGGCGAAATTGAAATACCACTACTTTTGACGTTATTTTACT
TATTCCGTGAAACGGAGGCGGGGCATCGCCCCTCTTTTTGGACCCAAGGCCGGCCTCGCGCCGGCCGATCCGGGCGGAAGACATTGTCAGGTGGGGAGTT
TGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGGAACAAAAGGGTAAAAGCTCGTT
TGATTCTGATTTCCAGTACGAATACGAACCGTGAAAGCGTGGCCTATCGATCCTTTAGACCTTCTGAATTTGAAGCTAGAGGTGTCAGAAAAGTTACCAC
AGGGATAACTGGCTTGTGGCAGCCCAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCACCAAG
TGTTGGATTGTTCACCCACCAATAGGGGACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGACAGTGTCGCAATAGTAAT
TCAACCTAGTACGAGAGGAAACGTTGATTCGCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGCGCTGGATTATGACTGA
ACGCCTCTAAGTCAGAATCCGGGCTAAAAGCGACGCATTCGCCCGCCGCCCGT