Detailed information on CNT3047192


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30519140Prunus dulcisJuglans regia47.555.2195.041612forward
CNT30374695Prunus dulcisArabidopsis thaliana37.5440.8292.231274reverse complement
CNT30730436Prunus dulcisCorchorus capsularis41.57100.2194.761411forward
CNT3072442Prunus dulcisQuercus suber47.592.8692.061612forward
CNT30381259Prunus dulcisManihot esculenta45.1484.5591.321532forward
CNT30544869Prunus dulcisBrassica napus47.5382.6892.751613reverse complement
CNT30234560Prunus dulcisBrassica oleracea47.5884.6992.821615reverse complement
CNT30312195Prunus dulcisCamelina sativa47.5864.7693.441615reverse complement
CNT30206613Prunus dulcisHelianthus annuus33.8266.0594.341148forward
CNT30434075Prunus dulcisPapaver somniferum47.560.0692.681612forward
CNT3027145Prunus dulcisPopulus trichocarpa30.8263.9496.371046reverse complement

Expression of CNT3047192

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MCASQRAIKPVRRKEAGWRDPLEGCTADRP*

>peptide 2 (40 aa)
MNRKPGYGAQLSANLEPTKGVGRLRQQDGGHGSRNPLRSV*

>peptide 3 (38 aa)
RPQVRGGYPLNLSISISGGKETYKDSPSNGERTGNSPA*

>peptide 4 (85 aa)
MEQCRQGKTAKWIRNLGKRIGSEGWARGSQSRTRRLSVDCSSCSRGESGSPRAGRGTDWERSFGDFPPASNSRLRTGTDKGNPTV*

>peptide 5 (55 aa)
MRPGRMWNGHKPVRRSARGVDRCGLRRRQKPGLLICPRRRRRRDRGRQHAPSRRA*

>peptide 6 (62 aa)
MASELWSGEASSAADRAQVHWKVAPERVRAPLCPDPVAPRGAVGERVVWECSPNQAVNSVQG*

>peptide 7 (40 aa)
MQPQSGGKFCPRLNTGERPIANKYREGKMKKTLKRESKSA*

>peptide 8 (46 aa)
MNGLTNSPCPRLLSVKPMTKRERAWRESMRGKDLLSLTLVRLCEMT*

Sequence

>CNT3047192
CGACCCCAGGTCAGGGGGGGTTACCCGCTGAATTTAAGCATATCAATAAGCGGAGGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCG
GGAATAGCCCAGCTTGAGAATCGGGCGCCCATGGCGTCCGAATTGTGGTCTGGAGAAGCGTCCTCAGCGGCGGACCGGGCCCAAGTCCACTGGAAGGTGG
CGCCGGAGAGGGTGAGAGCCCCGTTGTGCCCGGACCCTGTCGCACCACGAGGCGCTGTCGGCGAGCGGGTTGTTTGGGAATGCAGCCCCAATCAGGCGGT
AAATTCTGTCCAAGGCTAAATACGGGCGAGAGACCGATAGCAAACAAGTACCGCGAGGGAAAGATGAAAAAGACTTTGAAAAGAGAGTCAAAGAGTGCTT
GAAATTGTCGGGAGGGGAGCGGATGGGGGCCGGCGATGCGCCCCGGTCGGATGTGGAACGGTCACAAGCCGGTCCGCCGATCGGCTCGGGGCGTTGACCG
ATGCGGATTGCGGCGGCGGCAAAAGCCCGGGCTGTTGATATGCCCGCGGAGACGCCGTCGACGCGATCGTGGTAGGCAGCACGCCCCGTCTCGGCGTGCC
TAGGCATCTGCGTGCTCCTGGCATCGGCCTGTGGGCTCCCCATTCGGCCCGTCTTGAAAAACGGACCAAGGAGGCTGACATGTGTGCGAGTCAACGGGCG
ATTAAACCCGTAAGGCGTAAGGAAGCTGGCTGGCGGGATCCCCTCGAGGGTTGCACCGCCGACCGACCTTGATCTTCTGAGAAGGGTTCGAGTGAGAGCA
TGCTTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATACTGACGTGCAAATCGTT
CGTCTGACTTGGGTATAGAGGCGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGAGCCCGTGAACGAGTTC
TATCGGGTAAAGCCAATGATTAGAGGCATCGGGGCGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGCGCGGCTGCTTTGTTGAGCAG
CGCCATGGAATCGAGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCGGGTTACGGGGCCCAACTGAGCGCTA
ACCTAGAACCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAAT
CAACTAACCCCGAAAATGGATGGCGCTTAAGCGCGCGACCTATACCCGGCCGTCGGGGCAAGTGCCAGGCCCCGATGAGTAGGAGAGCGCGGCGGTCGCT
GCAAAACCTGGGGCGCGAGCCCGGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGA
AAGGTTCCATGTGAGCGGCACTTGCACATGGGTTAGTCGATCCTAAGAGACGGGGGAAGCCCGTCTGATAGCGCGTCTCGCGCGAACTTCGAAAAGGAAT
CGGGTTAAAATTCCTGAACCGGGGCGTGGTGGTTGGCAACAGCGTTAAGTCCGAGGAGAGGCGTCGGCGGGGAACCTCGGGAAAGTTATCTTTTACGTTT
AACGAAACCTGCCCACCACAAACGGCTTCGGCCGGTAAGTCAGCGGAATTTGGAAAAACACCCTGCGTCGGCGTGGTGGTGTCGGTCGCCCCGGCGACCC
TTGAAAATCCGCAGGAGGGCCGAAGTGCCATTCCGCGGTCGTACTCATAACGCATCAGTCTCCAAGGTGAACGACCAGTCGATGGAACAATGTAGGCAAG
GGAAGACGGCAAAATGGATCCGTAACCTCGGAAAAAGGATTGGCTCTGAGGGCTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGCTGTCGGTGGACTG
CTCGAGCTGCTCCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACTGGGAGCGTTCCTTCGGGGACTTTCCCCCGGCGTCGAACAGCCGC
CTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCCAGCGGATGCTAAAGCAATGTGATTTCTGCCCGATT
CTTTCGAATGTCAAAGTGAAGAAATTCAACCAAGCGGATAATGGCAGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTACCGTCATCTAATTAG
TGAGCGCATGAATGGATTAACGAATTCCCCTTGTCCACGTCTACTATCAGTGAAACCAATGACCAAAAGGGAGCGGGCTTGGCGAGAATCAATGAGGGGA
AAAGACCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGTATAAGTGGGAGCTTCGGCGAAATTGAAATACCACTACTTTTG
ACGTTATTTTACTTATTCCGTGAAACGGAGGCGGGGCATCGCCCCTCTTTTTGGACCCAAGGCCGGCCTCGCGCCGGCCGATCCGGGCGGAAGACATTGT
CAGGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGGAACAAAAGG
GTAAAAGCTCGTTTGATTCTGATTTCCAGTACGAATACGAACCGTGAAAGCGTGGCCTATCGATCCTTTAGACCTTCTGAATTTGAAGCTAGAGGTGTCA
GAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCCAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGC
AGAATTCACCAAGTGTTGGATTGTTCACCCACCAATAGGGGACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGACAGTG
TCGCAATAGTAATTCAACCTAGTACGAGAGGAAACGTTGATTCGCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGCGCT
GGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTAAAAGCGACGCATTCGCCCGCCGCCCGTTTGCCGACCNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN