« Back to Saccharum spontaneum search


Detailed information on CNT30471488


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30367792Saccharum spontaneumSorghum bicolor90.143.2688.28273forward
CNT30582626Saccharum spontaneumEchinochloa crusgalli66.0124.6986.5200forward

Expression of CNT30471488

Peptides detected in this lncRNA

>peptide 1 (54 aa)
VRMKIQIHIESLTTQTHITQILGTKFSQCKISINLLIFAEAGASIETSTKPVDL*

Sequence

>CNT30471488
TGTGCGAATGAAGATACAAATCCATATTGAAAGTCTGACAACACAAACTCATATTACTCAAATACTTGGCACTAAATTCAGCCAGTGTAAAATCTCGATA
AATTTGCTGATCTTCGCAGAAGCCGGTGCATCAATCGAAACCAGTACTAAGCCAGTAGATCTGTAGGTACACAGGGGAACCAATAAGCTACTGCTACAAG
ACTAGATCCACACAATTTGCAGCTTAATACGAACTTGTCGAGCCCAAGAACCCTACCAGATCTTGGCGTCCGCCGCGTTGGGCTCGTCGAGGAAGAGGTC
TTC