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Detailed information on CNT30471281


BLAST search results

BLAST vs Swiss-Prot:
sp|Q09092|SRK6_BRAOV, E-value = 2e-06

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30139133Saccharum spontaneumLolium perenne14.5723.9189.3966forward

Expression of CNT30471281

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MAKVVVSLQSRRWGTESNTLECGIGTFETLTLVGSLRYIVRTSDVGCSH*

>peptide 2 (45 aa)
MGHRIKHIGMWNRDIRNINPCWKLEIYCSYIRCWVQSLMQIFLQV*

Sequence

>CNT30471281
TTTTTTCACAATCGTGAGACCACACACAAGATGTATTCAGAATTTCAGATAAGGAAGCACACCTAGGTCCATGGCGAAAGTAGTTGTTTCACTACAGTCA
AGGCGATGGGGCACAGAATCAAACACATTGGAATGTGGAATAGGGACATTCGAAACATTAACCCTTGTTGGAAGCTTGAGATATATTGTTCGTACATCAG
ATGTTGGGTGCAGTCACTGATGCAAATATTCCTACAAGTTTGAAGAGAAACTGACAGAAGATGTTGCTGATCTGACCCCCAAAAATCTGTATTTGGAAGT
TTCACAAATTTCATAGAAGTTTTGTCATAATCATCACAGGTTATGTTGACAATACCCATACATCCTTCAGTCCAGTTACCTGGGTTTCTCATCGCATAAC
CTGGTGGGCATGAACATGTTGGTTTAGGCTATAGAGACGGAGATTACCATCGG