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Detailed information on CNT3047103


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30155224Prunus dulcisPrunus persica23.0829.8398.15162forward
CNT30705229Prunus dulcisPrunus avium49.8664.4698.29350forward

Expression of CNT3047103

Peptides detected in this lncRNA

>peptide 1 (62 aa)
MMFGYGINNISIPVLKSLSGHVICLVRFSLCDLFGSELFILVSKPGKDRAVAFGALRTLVEND

>peptide 2 (33 aa)
MAARPNRVRSDLCVKRTFDSMISPNGEKAIAKK*

>peptide 3 (30 aa)
PGLTVVDDLKTQKRTKSNQIRPHNHNKYTK*

Sequence

>CNT3047103
CTCCCGGTCTCACGGTCGTTGATGATCTGAAAACACAAAAACGAACCAAATCGAATCAGATCCGTCCACATAATCATAACAAATACACAAAATAAGCGAA
AATGAAAAGGAACCGATCGATCTTCAATCTTTGGGAGAGAAAGATGAAGATGAACGTACCCGATTTTGGGAGTGAGTAATAATAAGAATCATATAGTAAC
AGAGAATCATAGATCAAGTAACATAGAGAAACAGAAGATCAAGTAGCAGAGAGAGAACAACAGATGGCCGCGAGGCCGAATCGGGTCAGATCCGATCTCT
GCGTCAAACGGACCTTCGATTCGATGATCTCACCGAACGGAGAAAAGGCCATTGCTAAAAAGTAACCGGAGAAAAGAGGACTGGAATTTTTGTAAAGGAA
GAAGAGAACAAGAGAGCACGAAGGACAGCTACGCCCAAAGCCTCGTTATATAGAGCCTCTTCCCCCTCAACTAGGGTTAGCTTGTTTGGTTACTCGGGTT
CAAATCCAAACCTATGATGTTTGGTTACGGGATTAATAATATCTCTATCCCGGTTTTGAAATCATTATCAGGACACGTCATCTGTTTGGTACGTTTTTCG
CTGTGTGATTTGTTTGGTTCGGAGTTATTTATCCTCGTTTCCAAACCGGGAAAGGATAGAGCCGTGGCATTCGGTGCGTTACGGACTCTGGTTGAAAACG
AT