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Detailed information on CNT30470737


BLAST search results

BLAST vs Swiss-Prot:
sp|P19656|NLTP_MAIZE, E-value = 4e-33

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30352811Saccharum spontaneumEragrostis tef49.3625.7485.42192forward
CNT30104631Saccharum spontaneumOryza rufipogon50.1356.0388.21195forward

Expression of CNT30470737

Peptides detected in this lncRNA

>peptide 1 (75 aa)
MAELTCPQLMAASEVAASTTTTAATTEIATASCMRAMSIDVLGAECLGVCDDRVLVLALECSESKCWLVRRLQWSV

>peptide 2 (97 aa)
PGAVGGGADGVRDADAALGGDAGGVAGVEAPDAAAAARGGRGALAAGVGQAGRDGRAHLPAADGGLRGRRQHHHHRGHDGDRHSKLHASHVDRCSGC*

Sequence

>CNT30470737
CCTGGAGCAGTCGGTGGAGGTGCTGATGGTGTAAGGGACGCTGACGCCGCACTTGGAGGGGATGCTGGCGGCGTTGCCGGCGTTGAGGCTCCTGACGCCG
CTGCAGCAGCCCGCGGAGGGCGCGGAGCCCTGGCCGCGGGCGTAGGACAGGCAGGGCGCGATGGCCGAGCTCACCTGCCCGCAGCTGATGGCGGCCTCCG
AGGTCGCCGCCAGCACCACCACCACCGCGGCCACGACGGAGATCGCCACAGCAAGCTGCATGCGAGCCATGTCGATCGATGTTCTGGGTGCTGAGTGCCT
GGGTGTGTGTGACGACCGTGTGCTAGTGCTAGCTTTGGAATGCAGTGAGAGCAAGTGCTGGCTGGTGAGGAGATTGCAATGGAGTGTCG