Detailed information on CNT30469647


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9XGX1|CHS7_SORBI, E-value = 4e-40

BLAST vs NONCODE:
NONPOPT000627, E-value = 3e-18

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30281985Saccharum spontaneumChenopodium quinoa50.54.2384.16101forward
CNT30156272Saccharum spontaneumPistacia vera52.56.8182.86105forward
CNT3074040Saccharum spontaneumBrassica juncea5323.9886.79106forward
CNT30128249Saccharum spontaneumCorymbia citriodora7321.3586.3146forward
CNT30371283Saccharum spontaneumOryza glumipatula43.516.4295.487forward

Expression of CNT30469647

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MSTPEVVQKTRWVILDFGCPHSLIAFCAAALPSLGTSTTTMSWR

>peptide 2 (65 aa)
HHQAVHRGPQAQHLGELVVGARHVDAGGGAEDEVGDLGFRLPPLLDRLLRRGLAQLGDLHHHDVLA

Sequence

>CNT30469647
ACATCATCAGGCGGTTCACCGAGGGCCGCAGGCCCAGCATCTTGGTGAGCTGGTAGTCGGCGCCCGGCATGTCGACGCCGGAGGTGGTGCAGAAGACGAG
GTGGGTGATCTTGGATTTCGGCTGCCCCCACTCCTTGATCGCCTTCTGCGCCGCGGCCTTGCCCAGCTTGGGGACCTCCACCACCACGATGTCCTGGCGC