Detailed information on CNT30468850


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9XGX1|CHS7_SORBI, E-value = 4e-44

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30681726Saccharum spontaneumTriticum urartu84.1172.5888.33180forward
CNT30593102Saccharum spontaneumEragrostis curvula55.6154.8496.64119forward

Expression of CNT30468850

Peptides detected in this lncRNA

>peptide 1 (69 aa)
AEDEVGDLGFRLPPLLDRLLRRGLAQLGDLHHHDVLAGVQRRRHVRAHVGVLRQVLLRQVHVPLPDLRLV

>peptide 2 (70 aa)
VQKTRWVILDFGCPHSLIAFCAAALPSLGTSTTTMSWRASSDGAMYAHMLGFSARYSSVRCMYRFRICDLS

Sequence

>CNT30468850
GTGCAGAAGACGAGGTGGGTGATCTTGGATTTCGGCTGCCCCCACTCCTTGATCGCCTTCTGCGCCGCGGCCTTGCCCAGCTTGGGGACCTCCACCACCA
CGATGTCCTGGCGGGCGTCCAGCGACGGCGCCATGTACGCGCACATGTTGGGGTTCTCCGCCAGGTACTCCTCCGTCAGGTGCATGTACCGCTTCCGGAT
CTGCGACTTGTCGC