Detailed information on CNT3046844


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30590300Prunus dulcisMusa acuminata1435.592.9671forward
CNT30538793Prunus dulcisBrassica napus15.5820.4793.6779forward
CNT30309894Prunus dulcisCamelina sativa15.3837.3292.3178forward
CNT30716113Prunus dulcisMalus domestica golden34.3230.2688.51174forward
CNT30153721Prunus dulcisPrunus persica97.44100.298.58494forward
CNT30429165Prunus dulcisPapaver somniferum15.3821.9792.3178forward
CNT30704139Prunus dulcisPrunus avium99.6110095.84505forward
CNT30175528Prunus dulcisVigna angularis14.9924.3694.7476forward

Expression of CNT3046844

Peptides detected in this lncRNA

>peptide 1 (45 aa)
WVCGLSGSPGPCEYIQVAAQRLGFRLIKNPVVSSGAVAVIVLETQ*

Sequence

>CNT3046844
ATGGGTGTGTGGGCTTTCTGGGAGCCCAGGCCCATGTGAATATATACAAGTAGCCGCACAGCGATTAGGGTTCAGACTCATTAAAAACCCTGTGGTATCT
TCTGGAGCCGTCGCGGTCATCGTTTTGGAGACACAGTAGCAGCATTTCTCAGCGAGGATGAGGGCCAAGTGGAAGAAGAAACGCATGAGGAGGTTGAAGA
GGAAGCGCCGAAAGATGAGACAGAGATCAAAGTAGGCAGCTTGTCGCTCCTTCATCTGCAACACCTTCTACCCATGTGAAGTTTTGTAGAGTGGAGGATG
ACTTGAGTATCTGTGTTTAAGTTTTCATAGTTTTGGGATTATAATTATGTGGATGTTAAGTGTTTTATCAAGTTTTACTCCGCATTTAATTGCATAATTA
AGTATGGATGCTGTTTATGCAAGTTTATTGATTGTGTTTTATGATGCAATGGGCATTTCAATTGATAATTTTTGATAATGTATGCATCTGTCAAATTAGA
TGTCAAA