Detailed information on CNT30468144


BLAST search results

BLAST vs Swiss-Prot:
sp|Q36284|NU5M_MAIZE, E-value = 4e-82

BLAST vs NONCODE: nothing found

Expression of CNT30468144

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MDGRGLPAPKSDDSLVPLSIGTLWHTTATTPAL*

>peptide 2 (39 aa)
MGIQKNRKMHIFYEILSFHRCIWSETVQYSMRGMQWDGW*

>peptide 3 (44 aa)
MELNQVTLQRHNDSRVGISPPSEPDVRVSPHPALCRGISTHCFP*

>peptide 4 (45 aa)
MGVYRRSQRLARKGCYTKHYYLTTKKEKTIVVTRLTIVVRPAALA*

>peptide 5 (52 aa)
MHFLQSVMEPSSAPPSQKERKEQNSRRRRVEYSQGAFVVRKGPNGRPCSEVH*

>peptide 6 (57 aa)
MEEPSKPVPDDDAPWAKGKGPPFSFFPQSFRSFLSFPFVCLGPRVGSFPPPIYAILCL

>peptide 7 (58 aa)
MRREGKGSRGLSRRSLFPIHPEGFFPSLAPSSYPVLLSAQPYLFISFFYMDIFFLSCS*

>peptide 8 (32 aa)
MKDDLESTQEDRESHIREKVTNGVEPSNIAKA*

>peptide 9 (46 aa)
MPPGRKERGRHSLSFLNRSDHFSHSLLFVWGPGLVRFLLLSTQFSVF

>peptide 10 (90 aa)
MVGAANSDSARISFFGSTKGELAQKLDRGKDAAGCRRLIQVPPEPREMVAYYTAHKLCLGWGYLLFVGGTYGARRASVCCVDCLCISYRV*

>peptide 11 (60 aa)
LASGTTGLMKPIMLDNQILLPSYLSTSLRQKISKVCICLHVPPSMLPLPRKGDYTYSIKN*

Sequence

>CNT30468144
TCTAGCTTCTGGCACAACTGGACTTATGAAACCGATCATGCTGGACAATCAAATACTTCTTCCCTCATACTTATCTACTTCGCTTAGGCAAAAGATTTCA
AAAGTCTGTATCTGTCTACATGTGCCTCCGTCTATGTTACCCCTTCCCCGGAAAGGTGATTATACGTATAGTATAAAAAACTAGAATAAAAAAGAAAGAA
GAGAAAGAACTGGGAGTTGGCGCCTACATAACAGGTAGCTTGCTTACCAAGCCGTCCTGGCAAGCTCCTACAGTTCTCTTATTATTCTTGACTTGACTTA
TTAATAAGAAAACTACTCACTAACAAAATGAAAGACGATCTAGAATCTACCCAAGAAGATAGAGAGTCCCACATACGAGAAAAGGTCACAAATGGAGTTG
AACCAAGTAACATTGCAAAGGCATAATGATAGTAGGGTCGGGATATCCCCGCCCTCCGAACCGGACGTGAGGGTCTCCCCTCATCCGGCTCTCTGCAGGG
GAATCTCCACTCACTGCTTCCCCTAATATCCTCCCTTTACCACATCATGGGGGTTTACAGGAGATCCCAGAGACTCGCTCGGAAAGGCTGCTATACCAAA
CATTATTACTTAACTACAAAGAAAGAAAAGACTATAGTAGTCACTAGACTGACTATAGTAGTCCGTCCGGCTGCTCTTGCTTAAATCATTACTCTTCATT
CTCCCGTGCTCTAGCAATTGCGCTCCCTAGACCACTACCATTTAGTTAGGTAGGGACAATCAATCCATAGTTACGGGAATAACGGAATGCATGGGGATCC
AAAAAAATAGAAAAATGCATATTTTCTATGAAATCCTTTCTTTCCATAGATGTATCTGGTCTGAGACGGTACAGTACTCTATGAGAGGAATGCAATGGGA
TGGATGGTAGAGGGCTGCCTGCGCCCAAAAGCGATGATTCACTTGTCCCCTTGTCTATAGGGACCTTGTGGCATACAACCGCCACGACTCCTGCGTTATA
GCCGCCCCTTTCTCTCTTTCTTTTGACTGCCTCGTGGACGGACGAAAGAAGGGAAGTTACAGAAGGGGGCAGTGAAGGCTCGCCAAGTAGACAGCAAGCC
CCCACCCCGTCAGTCCTGTGTTGCCGTAGCGTGCCCTACTTCAATAAGGTATTACCTCGCCGATTTGAAAGGGGATGGGATTCATTCACTTGCATTCCTG
CTAGCACTACAAAAAGCTCCGGTCTTAACGACCCTACGGAAGCTGTGCAGCCTTTCCTCGGGTTCGTAGAGTCGGGTTTCCCGTTTACCCACAACGGAGG
AGCCGCCCCCACCAACCAAAGCAGGTAGGCGGCCACGGTTCATAACGCACTCTTCGCACAACAGATCCACTTTGAAGTTGACTTATTCGCTCGGCCAATC
GTCGGAATGTGTACGAGATACCATAAGGGCCCAATATCTCAATAGCACCCTTGTCTAAAGCTTCGAATGAGACTGAATATCCGAAACGCAGGAACGATCT
GACTAGAAAGTCATTCAAAACTTGATCGAAGAACCAGCGTTTATTGAAGAAGCTATAGAGTCGATTACAAAAAGTACTAGTTTGAAAGGCTCGTTGGAAT
TGATCCGCTACGAGATTGACATTATACGCTAGAGAAGCACCTGAAGTACTAAACAGAATAGGTATTAGTTTTGTAATGGTTGGAGCAGCAAACTCGGATT
CGGCAAGAATCTCATTTTTTGGTAGTACGAAGGGGGAATTGGCCCAAAAATTGGATAGGGGTAAAGACGCAGCCGGGTGCCGGCGGCTTATTCAAGTGCC
CCCCGAACCGCGCGAAATGGTCGCCTATTACACGGCTCACAAACTCTGCCTGGGGTGGGGCTACCTATTATTCGTAGGCGGTACGTACGGCGCACGCAGG
GCCTCGGTTTGCTGCGTGGACTGTCTATGCATTTCCTACAGAGTGTAATGGAACCCAGCTCAGCTCCGCCGAGCCAAAAGGAAAGAAAAGAACAGAACAG
CCGGAGGCGAAGAGTAGAGTATAGCCAAGGGGCTTTCGTCGTCCGTAAAGGACCTAACGGAAGACCGTGCTCCGAAGTGCACTGAGAGTTTAGTTTTAAT
AACACTTGGCCTTACCCCTTCGTTTTGAGCCATGTCTAGGTAGAATCGGCAAGATTGAACCGAGGCCCGCCCGGGCACCGCCGGGGGGACAACCAGACCA
ACCAGTAGGCTTTCTTTCCGAAGTTTCCTCCCGGGGCCCTTAAATCATTGAATTCATAGGCATAGGGGCGTCCCAGGCAGTGGTTCATTCAATGAGAAAG
AAAGACAGGAGGGCAGGATTCGTCGTGTCGGGCGAATTCATTCTGGGAAAAAAGGGGGATTTTGAGTGAGCTATGCGAAGGGAAGGGAAAGGGAGTCGTG
GGCTGAGCCGGAGGTCACTTTTCCCGATCCATCCCGAAGGTTTTTTTCCCTCTCTCGCCCCATCATCGTACCCAGTCCTGCTATCGGCTCAGCCCTATCT
ATTCATCTCTTTTTTTTACATGGATATTTTTTTTCTCTCTTGTTCATAGATCTTGAAAGCGGATCAATAGAAATTTCTCAAAGGATCTATCTATAGAAAG
ATCTAGATCTCTATCATCATCTATCTCTATATCTAAATATGGAAGAACCCTCGAAGCCTGTCCCCGACGACGATGCCCCCTGGGCGAAAGGAAAGGGGCC
GCCATTCTCTTTCTTTCCTCAATCGTTCCGATCATTTCTCTCATTCCCTTTTGTTTGTTTGGGGCCCCGGGTTGGTTCGTTTCCTCCTCCTATCTACGCA
ATTCTCTGTCTTCG