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Detailed information on CNT30467514


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30584737Saccharum spontaneumEchinochloa crusgalli37.5427.786.73226reverse complement

Expression of CNT30467514

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MAPVIRPGDLGIVSRVTCDSVNLIPCYLSTL*

>peptide 2 (37 aa)
MHSGHRSYSSYHESVYFWWWVVCVHADVIGPQNLLYW*

>peptide 3 (42 aa)
KASTRSVVRRNRAAQTVQTNCHHEMTECQARSVLQHGKLKFY*

>peptide 4 (44 aa)
MNLYIFGGGWFVFMLMLLDHKIYCTGRGKSNSDSVEFVETGILG*

Sequence

>CNT30467514
GAAGGCAAGCACAAGAAGTGTTGTCAGGAGGAACCGGGCCGCTCAAACAGTGCAGACCAACTGTCATCACGAGATGACTGAGTGCCAGGCAAGATCAGTG
CTACAACATGGAAAGTTGAAATTCTACTGACTTTGGAGACCAAATTATTGAGTTTTATATGCACTCTGGTCACAGGTCTTATTCTTCATACCATGAATCT
GTATATTTTTGGTGGTGGGTGGTTTGTGTTCATGCTGATGTTATTGGACCACAAAATTTACTGTACTGGTAGAGGCAAATCTAATAGTGATAGTGTTGAG
TTTGTGGAAACTGGTATACTGGGGTAGGTCTATATTGTTCTTTTACCATGGTGTGCTAAAGACATCATGGCGCCTGTAATTCGTCCAGGAGATCTTGGTA
TTGTCTCCCGTGTGACATGTGACTCAGTTAATTTGATACCGTGCTACCTGAGTACCCTTTGATCCCTAAGTAGCAATTAATTTTGTTAGTGTTCATCTTA
TTAATAATCAACTGTTCACTGAGAAGTTGTTAATTTTAGCGAATTATTGATGTAAATATGATAACCTGGAGCATGATTGTTTGCTGTTGTGTTATCGTTT
CC