Detailed information on CNT3046714


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONVVIT003033, E-value = 5e-66

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30712870Prunus dulcisGlycine max98.5912.6488.57210reverse complement
CNT30157603Prunus dulcisPistacia vera79.3417.7185.8169reverse complement
CNT3092080Prunus dulcisSolanum tuberosum98.5936.0290.48210reverse complement
CNT30223394Prunus dulcisHordeum vulgare92.4917.0986.29197reverse complement
CNT30147386Prunus dulcisMedicago truncatula98.5913.6288.57210reverse complement
CNT30435868Prunus dulcisAegilops tauschii92.9614.287.37198reverse complement
CNT30242786Prunus dulcisAvena sativa93.4322.9886.93199reverse complement
CNT30667558Prunus dulcisTriticum dicoccoides92.9617.2887.88198reverse complement
CNT30605266Prunus dulcisGossypium raimondii98.5910.0390.48210reverse complement
CNT30721940Prunus dulcisTriticum spelta92.9617.187.37198reverse complement
CNT30360996Prunus dulcisLactuca sativa97.6514.2690.38208reverse complement
CNT30331546Prunus dulcisDioscorea rotundata46.0123.589.898forward
CNT30113381Prunus dulcisFicus carica98.5947.0989.05210forward

Expression of CNT3046714

Peptides detected in this lncRNA

>peptide 1 (58 aa)
KALSSAHSTDFSHRISNSLLHSLNKVIFTFPSRYLYVLSVIKEYVGLEGGPHFSHKSD*

Sequence

>CNT3046714
TAAAGGCTCTAAGCTCCGCTCATTCGACTGATTTTTCGCACCGGATCTCAAATTCTCTATTGCACTCCCTCAATAAGGTTATTTTCACATTTCCCTCACG
GTACTTGTATGTGCTATCGGTCATTAAGGAATACGTAGGCTTAGAGGGTGGTCCCCATTTCTCGCATAAAAGCGATTAGAATTCAAACACGTCGTGTTTT
ACTGGGAAGGTTC