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Detailed information on CNT30466845


BLAST search results

BLAST vs Swiss-Prot:
sp|C0LGH2|Y1561_ARATH, E-value = 6e-35

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692644Saccharum spontaneumOryza sativa68.2949.5986.19239forward

Expression of CNT30466845

Peptides detected in this lncRNA

>peptide 1 (54 aa)
CACNFSADMSLLLIKELGKPEIRDLGCELGVKQNIAGLDVPMHDAHAGLLMKIG*

>peptide 2 (36 aa)
MISKRVGQSRLKPLSPVHSKTETSRKVFFITRNVVV*

Sequence

>CNT30466845
AATGTGCCTGCAATTTTAGTGCTGACATGAGTCTTCTTCTCATCAAAGAGCTTGGCAAGCCCGAAATCAGAGATCTTGGGTGTGAGCTCGGTGTCAAGCA
AAACATTGCTGGCCTTGATGTCCCTATGCACGATGCGCACGCTGGACTCCTCATGAAGATAGGTTAGGCCTCTTGCAATACCTAGAATGATCTCGAAGCG
TGTTGGCCAGTCAAGGCTCAAGCCACTGTCACCTGTACATTCAAAAACAGAAACCTCGAGAAAAGTTTTCTTTATAACTAGAAATGTGGTTGTTTAAAGG
CATGTGATGATGGGGATGAGTCGAAGTTAGCACACCAAAGAGTGCTCGAT