Detailed information on CNT3046645


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30154898Prunus dulcisPrunus persica31.522.3193.15555reverse complement

Expression of CNT3046645

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MEFCTICMILMWWMKKALAQIKQGTHPFA*

>peptide 2 (48 aa)
MSMFSRRVPFGYGFCEFCFGLVEHYRGISLFIHISLSLSLSLSLSLSL*

>peptide 3 (45 aa)
MYFVHKFFLRHLFKLVGIVTEEVFYSSFHFDQFHRHIIEVSNVNV*

>peptide 4 (69 aa)
MDFVSFVLDWLSITEVSLSSSTSLSLSLSLSLSLSLSKLYIASFIVSLYLCGHSLDFPGIVKDMASEPY*

>peptide 5 (39 aa)
MEFFICYFSWRIVKIYSHSNFAIWLYTNMMVSEVTLLGP*

>peptide 6 (38 aa)
MLFTWVVISEILLMLNCSFDASLQFFFMYWSLKEVLIC*

Sequence

>CNT3046645
TTTTTTTTTTTTTTTTTTCTACTCGTCTCATCGCTCGAGCAACGCTTGCTCTGAGCTCAAGCTTCAAGCCTCCATAGCAGAAGCTTGAAGCTTTGTTGCT
CCCTCTCTCTCTCTCCATCTCTCTCTTCTTCCCTGTCTCTCATAAGTTACTTTTAGGGCTGGGCATCTGAGCACTGCCCTCGCCGCCTCCTCCCGTCTCT
GCGATTCTGTCAGTTGAAGTCTCGGCGTCACACGCCACCGAACAGGCGCGCACCATTGGCTCGTCGTGAGCTGGAGTTTCTCATCTCTGATCTCTACAAT
CATGTAGATTTTTAGTTCCCTTTTTGTCCTTGTTACTGAAGATTTGATTTATAGCTTATTTATATCTAATTTGATTTTATTTATATGAATTCTTGTGTGT
AACCTGATTGATTATTTTTTCATAGAAAGTGATGAAATGCTTTTAGATTTTGACATTATGGGTCCATTGTGTTCCCTATTCTGGTTATAGAATTCATTGG
TTTCAATTTTTTCAGTTGTTTTTGTTTTTTGTTTTTATTATCTCATTTGAAGTCTCTAGCACTCAGAAGTCTGAAGGATATTTGCTCAGTTATGCTATTC
ACATGGGTTGTAATTTCTGAGATCCTGCTTATGTTGAATTGTTCATTTGATGCTTCTCTGCAATTTTTTTTCATGTATTGGTCCTTAAAAGAAGTATTAA
TATGTTAATCAACTTCTATATTCTATTTAAAAAGAATTCTTGAATATGTAGTCTTTTGCACATCAGCTTGCCATTAGTATGAGCTCTGCAGTCAAAATTA
ACTCAATTTATTGTGATTGATCGTTTCACTTAACATGACAAGTTTTGATAAGAGCTTGTTCAGTATGTGACAGTAAATATCATGTATTTTGTACACAAGT
TTTTTCTTAGACATTTGTTCAAACTAGTAGGAATTGTTACAGAAGAAGTTTTCTACTCAAGTTTTCATTTTGATCAATTTCATAGACACATTATAGAGGT
ATCAAATGTCAATGTTTAGCCGTAGGGTGCCCTTTGGTTATGGATTTTGTGAGTTTTGTTTTGGACTGGTTGAGCATTACAGAGGTATCTCTCTCTTCAT
CCACATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAAGTTATATATAGCCAGTTTTATTGTTTCTTTATATTTGTGTGGCCATAG
TTTGGATTTTCCTGGTATTGTCAAGGATATGGCTAGTGAACCATATTGAAGGTTATAGTAAGTTGTTCTACTGTTATGAAAAATCAAGCTTTGAATAGAG
TTGTCATGAGCTTGCCCAAATTGGGTTCCATGTAGATTATGTTCTAAGAAGGCTTGTTAGATTTGACAGAGTCTAAGAAGGAAATATTACAGTGCATACC
TTACCATGGAATTCTTTATTCATGGATTGTGTTGTGTGTGGTAGCAATTTTGTATCTCAGCTATATCATGGAATTCTTTATCTGCTATTTTAGTTGGAGA
ATTGTGAAGATTTATTCTCATTCCAATTTTGCAATTTGGTTATATACAAATATGATGGTGTCTGAAGTGACATTATTGGGGCCCTAATGGAATTTTGCAC
AATTTGCATGATCTTGATGTGGTGGATGAAGAAAGCTCTTGCGCAAATCAAGCAGGGAACACACCCATTTGCATGAGTGAGGACAATGCTAATGAAATTA
GTGATGCTAGAGATTAGATAGCCGGAGCAATATCATTAGTCTTAGAATTTATTTAGTCTAG