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Detailed information on CNT30463588


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30585114Saccharum spontaneumEchinochloa crusgalli42.0751.5394.49236forward

Expression of CNT30463588

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MTVLIPSSALSARLFSAGASFLACAKLGALALAPRWMDRRA*

Sequence

>CNT30463588
GCCAATCAACACTAAAACTCAGGTTTTTACTGACTCATATTTGCCACACGCCGATCCACAGCAAAACATTGTTATTATGAACTGAAACGCATTCTTCATT
TCCATGCCAGCACAGTAGCGTAGGCCTTCAGAGGGGAGGCACTGAAATCAGGTGGCAGAACTTTTCATCATCATCATCATACTATGTTACAACGGGTCGG
CAAGGCAACCAGCCAGATCTGAAAGCCGAGCTCGGTTGCAGAAAGCCGAAACCAAACCGAGGCCTTAGTTGGGGCCCCAGCAGCTGAGGTACATGACGGT
CCTCATCCCCTCCTCCGCCTTGTCCGCCCGCCTCTTCTCCGCCGGCGCCAGCTTCTTGGCCTGCGCGAAGCTGGGAGCGTTGGCCTTGGCGCCCCGGTGG
ATGGACCGCAGAGCGTAGTTCCAGCGGCAGAGCCCCGCCTGGTCCTTGAGCGCCTCCACCGCGCCCACGCTCATCGCCACCATCCACGGCGCCTTCGCTG
CAGCGGCCATCTATGTACGTATCAGTTTGGTGATCGGTGTGGTTGCTGTGACTGAGTGAGA