Detailed information on CNT3046345


BLAST search results

BLAST vs Swiss-Prot:
sp|P15192|CB22_PINSY, E-value = 6e-54

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30507950Prunus dulcisNicotiana attenuata52.9547.7988.46260forward
CNT3091866Prunus dulcisSolanum tuberosum53.5633.5589.73263forward
CNT30173248Prunus dulcisTrifolium pratense77.1957.679.95379forward
CNT30145117Prunus dulcisMedicago truncatula56.0129.8985.82275forward
CNT30598305Prunus dulcisFraxinus excelsior54.9939.5384.44270forward
CNT30202642Prunus dulcisHelianthus annuus43.7938.687.44215forward
CNT30154007Prunus dulcisPrunus persica52.14101.9995.7256forward
CNT30646148Prunus dulcisCannabis sativa39.7147.7984.1195forward

Expression of CNT3046345

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MANLPFLSSFTLSSAKASGSSARPNGSKLPPG*

>peptide 2 (35 aa)
MLSIASKQIYITNKSLQTKEENNFPAHFPGTKFVA*

>peptide 3 (34 aa)
MGQSFHLGKVGQLSLQVAHQQFCNPQLHPSTQLG*

Sequence

>CNT3046345
TCACCAAATAAAAATCGAAAACAAACGCATTTTTAACTAGGAAAGTTCTAGTCATGTTGTCCATTGCTTCGAAACAAATTTACATCACCAACAAGAGTCT
CCAAACAAAAGAAGAAAACAATTTCCCAGCTCACTTTCCGGGGACAAAATTTGTGGCATAGGACCAGGCGTTGTTGTTGACTGGGTCTGCAAGGTGGTCA
GCAAGGTTCTCCAATGGCCAATCTACCGTTCTTGAGCTCCTTCACCTTGAGCTCAGCAAAAGCCTCTGGGTCATCAGCAAGGCCCAATGGGTCAAAGCTT
CCACCTGGGTAAAGTGGGTCAGTTATCTCTCCAAGTGGCCCACCAGCAATTCTGTAACCCTCAACTGCACCCATCAACACAACTTGGGTAGCCCAGATGG
CCAAGATGCTTTGGGCATGGACCAAGCTAGGGTTGCCCAAGTAGTCAAGACCGCCCTCGCTGAAGATTTGGGCTCCGGCCTTGAACCACAC