« Back to Saccharum spontaneum search


Detailed information on CNT30462408


BLAST search results

BLAST vs Swiss-Prot:
sp|Q2RB28|MIF1_ORYSJ, E-value = 2e-23

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
nothing found

Expression of CNT30462408

Peptides detected in this lncRNA

>peptide 1 (69 aa)
MQLPNHFNAPTSHDDTHLLAAADGSSTGGGGGGGGGAVAVVAGLHLAPVEAAVAPAGRARQRRSCAHRA*

>peptide 2 (58 aa)
MNAGDTYVPPVPSFWFLMLASYAMEKMAWCGDLRDGRTSGNERLYCYLSRLWRRVDGFF

Sequence

>CNT30462408
CAAACACACAAATTCCAAACAAAGAAGCACATGTATACATATCTACCAAATATGTAAGATGTCTGTTTCATAAGTAAATAACAGGGAAAACATGTACACA
TCAGTTACAAGCACCATATACCAACGATCAAAACATATGTTACATCACACATAAAATTCACTGAATATCATCCAGGAACAAGAGAGGGACCGGAAAAGGA
AAAAAGGAAGAAATTAAAAGAAATATTGGCCCATATATATACGGCTGAATATAATGCAGCTACCAAACCATTTCAATGCCCCCACGAGCCATGACGACAC
CCATCTGCTAGCTGCTGCTGACGGCTCATCAACCGGAGGTGGTGGAGGTGGAGGTGGAGGAGCAGTCGCGGTCGTCGCCGGCCTCCACCTCGCGCCTGTG
GAAGCTGCGGTGGCACCCGCAGGCCGCGCACGCCAGCGCCGCAGCTGTGCCCACCGCGCCTGACGCCATGAACTCCCAGCACCCGTCCACGGCGTGCCCG
CCGATGGACGCCGCGTGGTTGCGCTGGCACTCCCGGTAGTGCACCACCTTCGCCTCCTTGCTCCTCGCCGCCGCCGTGCCGTTCGCCATGGACGACGACC
GGTCTTGCTGAGGCCCCATAGGGAACTGATGAACGCTGGCGATACGTACGTACCTCCGGTCCCCTCCTTCTGGTTCTTGATGCTAGCTAGCTATGCGATG
GAGAAGATGGCCTGGTGTGGAGACTTGAGAGATGGAAGGACTAGTGGGAACGAAAGGCTCTATTGCTATCTATCACGGCTTTGGAGGAGGGTGGACGGCT
TTTTTT