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Detailed information on CNT3046220


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30550344Prunus dulcisOryza brachyantha8.8128.9491.1868forward

Expression of CNT3046220

Peptides detected in this lncRNA

>peptide 1 (96 aa)
MVLADRIIEKNSLFCLLFPALLQPRILCNRSDRIDIPSTRHRFPSTPHRSLKESWTPAKSRNIFKVDLRCLHGKRIGLPQDWSFCFLGYTELKFSPS

>peptide 2 (47 aa)
MWMDVIPFSMNYMTSLHYSLILFASFSFSFLCLNPKKGFLLLLLLSF*

Sequence

>CNT3046220
TTAGATTTTAGATTTTGAGTATGTGGATGGATGTAATCCCTTTTTCCATGAATTACATGACTTCACTTCATTACTCTTTGATCCTTTTCGCTTCATTTTC
TTTTTCTTTCCTCTGTTTGAATCCAAAAAAAGGGTTTTTGTTGTTGTTGTTGTTGTCTTTTTGATGAAGCTGAGTGCCAAAGTTTTATAACTTGGGCCTA
AAGAAATAAGATTAAATGCTGCCTCACTAAATAGATAGAATTAAAGAGAAATTGGCCTCATTGGTTTTTTCATATTTCTCTTCTGTTTTGCATTTCCTTT
TAATCAGTGCCTCATAATAATAATGTGGTAGAATTTGGATGGTTTTTTTCTTGCACAAATCAACAAATCCACAATAACAAACAAAATTGGTTCAGATTCA
TCGGCCCCAATTTATTAAATCAATTTTATTAACATCATAAAACAGGCAATTAAACAATTCCCAATCATGGATCCGCAAACATGGTCCTTGCGGATCGGAT
CATAGAAAAAAACTCTCTTTTCTGTTTACTTTTTCCGGCTCTATTGCAACCGCGGATTTTATGCAATCGATCGGATCGTATAGATATCCCTTCAACACGA
CATAGGTTCCCTTCAACACCACATAGGTCATTGAAAGAATCTTGGACACCCGCCAAATCACGAAATATTTTTAAAGTTGATTTACGTTGCTTACATGGAA
AAAGAATTGGCCTCCCTCAGGACTGGAGTTTTTGTTTTTTGGGGTACACAGAACTGAAATTTTCGCCCTCAA