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Detailed information on CNT30461595


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3079106Saccharum spontaneumBrassica juncea6.720.2292.5954reverse complement
CNT30214058Saccharum spontaneumHelianthus annuus7.221.9793.158forward
CNT30367316Saccharum spontaneumSorghum bicolor9.6823.0889.7478reverse complement
CNT30107453Saccharum spontaneumOryza longistaminata7.221.8991.3858reverse complement
CNT3035140Saccharum spontaneumCucumis melo7.223.5891.3858reverse complement

Expression of CNT30461595

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MAWFWFSGFPSPSIAFPGSFILYISYAAKYENMTGKQVYPHLAPRDQEIHSF*

>peptide 2 (31 aa)
MRLRPMWPMYGTYIATLLGLAQSIENHNLTWY

Sequence

>CNT30461595
CTGATTCATGTCGATGGTTTGAAGACCTTCACCTCGTGTGAAAATTATGGCATGGTTCTGGTTTTCTGGTTTTCCTTCACCTAGCATTGCATTCCCTGGA
AGCTTTATCCTATATATATCCTATGCAGCAAAATATGAAAATATGACAGGTAAACAGGTTTATCCTCATTTGGCACCAAGAGATCAGGAAATACATTCAT
TCTAATAAGTACTATTTGAGTATTCTAGATTTCTTATACAGTTCTAGTGAAATATCATAGACCAATTCAATGACGCAATAGGTCATATATTGTTCCCTTT
AGCATACCTCAAAGTGCCAAACAAATCTAGGATACATATAGTGCCAATTTATAGTGCATGCATAGCCACGAAATTTAGCAGGTTACAAAGTAAAAAAAAA
TGGCATGGATTAAATTTTGGAACGAGCAATATCCACAACAACAAAAACAACAAAGCCAGAAAATAAATATATAGAGATATTGTTAGTGGATCTAAAGCCT
GTTCATGGTTCGGGCAGACAGCTGCTTCCTCTGCACTCATATTCTCTAGATATATTTCATCTTTAAGTCCCTTTTTATTGCCTCCTCCCATGTCAAGCCC
ACCTAGCTCAGTTAGTAGAGCACAAGGCTCTTAACCTTGTGGTTGTGGGTTCAAGCCCCATAATGGGTGTATTACAGATCCACAGTGTTGGAGTATGTGT
TTAGGCCCATGAGGCTAAGGCCCATGTGGCCCATGTATGGAACCTATATAGCTACCCTTCTAGGGTTAGCCCAATCAATAGAGAATCACAATCTAACATG
GTATCA