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Detailed information on CNT30460907


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 1e-56

BLAST vs NONCODE:
NONZMAT001339, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677010Saccharum spontaneumSetaria viridis25.5491.5194.12851forward
CNT30524664Saccharum spontaneumSetaria italica27.8267.7198.92927forward
CNT30639555Saccharum spontaneumNymphaea colorata46.189.9395.441536forward
CNT30536068Saccharum spontaneumEucalyptus grandis50.949.2592.981696reverse complement
CNT30513456Saccharum spontaneumJuglans regia49.7952.2794.091659forward
CNT30500477Saccharum spontaneumCoffea canephora45.3282.9294.171510forward
CNT30269781Saccharum spontaneumChenopodium quinoa49.0155.2692.961633forward
CNT30730500Saccharum spontaneumCorchorus capsularis34.6397.2294.711154forward
CNT30630109Saccharum spontaneumVigna unguiculata50.8453.7493.331694forward
CNT30196858Saccharum spontaneumPisum sativum46.783.7992.611556forward
CNT30503447Saccharum spontaneumNicotiana attenuata34.2768.2695.531142reverse complement
CNT3044711Saccharum spontaneumPrunus dulcis14.59101.8994.44486reverse complement
CNT3090144Saccharum spontaneumSolanum tuberosum50.6643.0294.671688forward
CNT30193801Saccharum spontaneumSecale cereale42.3810099.51412forward
CNT30291213Saccharum spontaneumTriticum aestivum69.1566.3299.182304forward
CNT30225309Saccharum spontaneumHordeum vulgare31.7587.895.461058forward
CNT30400299Saccharum spontaneumTriticum turgidum42.5666.4899.151418forward
CNT30569398Saccharum spontaneumActinidia chinensis19.9333.9892.47664forward
CNT30588765Saccharum spontaneumMusa acuminata18.2286.9695.72607reverse complement
CNT30511396Saccharum spontaneumSolanum lycopersicum18.4667.2190.89615forward
CNT30444225Saccharum spontaneumAegilops tauschii33.13100991104forward
CNT30248027Saccharum spontaneumAvena sativa29.1799.7997.43972reverse complement
CNT30668159Saccharum spontaneumTriticum dicoccoides21.4310095.8714forward
CNT30310298Saccharum spontaneumCamelina sativa30.6767.0295.41022reverse complement
CNT3062651Saccharum spontaneumArabidopsis lyrata20.6882.8195.94689reverse complement
CNT30136065Saccharum spontaneumLolium perenne19.36100.4797.98645forward
CNT30655263Saccharum spontaneumRosa chinensis46.7986.3791.731559forward
CNT30206724Saccharum spontaneumHelianthus annuus44.4568.2595.541481forward
CNT30713553Saccharum spontaneumMalus domestica golden15.6177.1593.65520forward
CNT30689042Saccharum spontaneumTriticum urartu66.6977.198.692222forward
CNT30720907Saccharum spontaneumTriticum spelta30.6410099.411021reverse complement
CNT30347837Saccharum spontaneumEragrostis tef1982.198.74633reverse complement
CNT30363261Saccharum spontaneumSorghum bicolor12.7333.3199.76424forward
CNT30620564Saccharum spontaneumCajanus cajan22.3914.4292.36746reverse complement
CNT30596725Saccharum spontaneumOryza meridionalis61.9459.8199.712064forward
CNT30154922Saccharum spontaneumPrunus persica47.1593.0191.341571reverse complement
CNT30410430Saccharum spontaneumPapaver somniferum44.1550.8594.151471reverse complement
CNT30646402Saccharum spontaneumCannabis sativa32.9286.7289.71097reverse complement
CNT30319706Saccharum spontaneumAsparagus officinalis48.3556.0595.971611forward
CNT3036965Saccharum spontaneumCucumis melo21.4398.0892.58714forward
CNT30332807Saccharum spontaneumDioscorea rotundata42.4185.5396.041413reverse complement
CNT30148090Saccharum spontaneumBrachypodium distachyon45.8652.699.541528reverse complement
CNT30103033Saccharum spontaneumOryza rufipogon46.499.6897.991546reverse complement
CNT30585638Saccharum spontaneumEchinochloa crusgalli23.5950.78100786reverse complement
CNT30604015Saccharum spontaneumOryza punctata15.13104.3595.63504reverse complement

Expression of CNT30460907

Peptides detected in this lncRNA

>peptide 1 (96 aa)
FVSSIYDFAFMDVDKILPFSSTLGWHSLNVNGEVQKRKGLRWIPRHPETRKGVASDEMLRGVENKHRSGDSQIGQPFELPAESMSRQETTWRTETS*

>peptide 2 (59 aa)
MPLEPRASWFSPKCVEAQQLTGHLGVKHCFGAGCASGTKSRQTLNTRYDPKITGVKVGQ*

>peptide 3 (29 aa)
MGHVESRVNQQGPPCKAKYSWVTDSEVVP*

>peptide 4 (36 aa)
MSALSSDFPRASGSTAETATGSPPIRGWSDRSMEIG*

>peptide 5 (38 aa)
MSRRLIGSGLVKGMEPTGAVAKASLHRAIVTAYGPEPG*

>peptide 6 (32 aa)
MSKCIGRGAFRLRGKQTRKRGSTKRKRECRLE*

>peptide 7 (35 aa)
MPRAEVRVPSAAALKYEPRGLAIASPRGSYQALRR*

>peptide 8 (68 aa)
MNGAKRSAEAVGCQNASVGERSALEGSKRESGGRRSGSENVGLSNENIGENPMPRKPKVSSARFVHGG*

>peptide 9 (72 aa)
MSVKMRTTCTWTERPYEALLFPGIGFGLFLRSLGGRRRRPPSGGPEPSVRYHSGRARILTLCQTRGPRDSLR*

>peptide 10 (48 aa)
MGDKLHRREGNSPDHQLRPLNDRSVIKEVGVQRQPGGLPRSSHPLKSA*

Sequence

>CNT30460907
AATTCGTCAGTTCGATCTATGATTTCGCATTCATGGACGTTGATAAGATCCTTCCATTTAGTAGCACCTTAGGATGGCATAGCCTTAACGTTAATGGCGA
GGTTCAAAAGAGGAAAGGCTTGCGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGCAAGCGACGAAATGCTTCGGGGAGTTGAAAATAAGCAT
AGATCCGGAGATTCCCAAATAGGTCAACCTTTTGAACTGCCTGCTGAATCCATGAGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAG
AGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAGCCTAAACCGTGAAAACGGGGTTGTGGGAGAGCAATACAAGCGTTGT
GCTGCTAGGCGAAGCGGTTGAGTGCCGCACCCTAGATGGCTAAAGTCCAGTAGCCGAAAGCATCACTAGCTTACGCTCTGACCCGAGTAGCATGGGGCAC
GTGGAATCCCGTGTGAATCAGCAAGGACCACCTTGCAAGGCTAAATACTCCTGGGTGACCGATAGCGAAGTAGTACCGTGAGGGAAAGGTGAAAAGAACC
CCCAGTGGGTAGTGAAATAGAACGTGAAACCGTGCTGAGCTCCCAAGCAGTGGGAGGGGAAAGTGATCTCTGACCGCGTGCCTGTTGAAGAATGAGCCGG
CGACTCATAGGCAGTGGCTTGGTTAAGGGAATGGAACCCACCGGAGCCGTAGCGAAAGCGAGTCTTCATAGGGCGATTGTCACTGCTTATGGACCCGAAC
CTGGGTGATCTATCCATGACCAGGATGAAGCTTGGATGAAACTAAGCAGAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGG
GTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCCCCGAAATGCGTTGAGGCGCAGCAGTTGACTGGACATCTAGGGGTAAAGCACTGTTTCGGTGC
GGGCTGCGCGAGCGGTACCAAATCGAGGCAAACTCTGAATACTAGATATGACCCAAAAATAACAGGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAA
GCTTCATCGTCGAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATAAAGGAGGTGGGGGTGCAAAGACAGCCAGGAGGT
TTGCCTAGAAGCAGCCACCCTTTAAAGAGTGCGTAATAGCTCACTGATCGAGCGCCCTTGCGCTGAAGATGAACGGGGCTAAGCGATCTGCCGAAGCTGT
GGGATGTCAAAATGCATCGGTAGGGGAGCGTTCCGCCTTAGAGGGAAGCAAACGCGAAAGCGGGGGTCGACGAAGCGGAAGCGAGAATGTCGGCTTGAGT
AACGAAAACATTGGTGAGAATCCAATGCCCCGAAAACCCAAGGTTTCCTCCGCAAGGTTCGTCCACGGAGGGTGAGTCAGGGCCTAAGATCAGGCCGAAA
GGCGTAGTCGATGGACAACAGGTCAATATTCCTGTACTACCCCTTGTTGGTACGGAGGGACGGAGGAGGCTAGGTTAGCCGAAAGATGGTTATAGGTTTA
AGGACACAAGGTGACCCTGCTTTTTCAGGGTAAGAAGGGGTAGAGAAAATGCCTCGAGCCGAGGTCCGAGTACCAAGCGCTGCAGCGCTGAAGTATGAGC
CCCGTGGACTAGCCATTGCTTCTCCACGAGGCTCATACCAGGCGCTACGGCGCTGAAGTATGTAACCCATGCCATACTCCCAGGAAAAGCTCGAACGACC
TTCAACAAAAGGGTACCTGTACCCGAAACCGACACAGGTGGGTAGGTAGAGAATACCTAGGGGCGCGAGACAACTCTCTCTAAGGAACTCGGCAAAATAG
CCCCGTAACTTCGGGAGAAGGGGTGCCCCTCGCAAAAGGGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT
AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAAGGAAGTTGGTGAACTGATGACAGGGAAGCCGGCGACCGAAGCCCCGGTGAACGG
CGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCCGCACGAAAGGCGTAACGATCTGGGCACTGTCTCGGAGAGAG
GCTCGGTGAAATAGACATGTCTGTGAAGATGCGGACTACCTGCACCTGGACAGAAAGACCCTATGAAGCTTTACTGTTCCCTGGGATTGGCTTTGGGCTT
TTCCTGCGCAGCTTAGGTGGAAGGCGAAGAAGGCCCCCTTCCGGGGGGCCCGAGCCATCAGTGAGATACCACTCTGGAAGAGCTCGGATTCTAACCTTGT
GTCAGACCCGCGGGCCAAGGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGCGTGCAAAGGTTTCCTCGGGCCA
GACGGACATTGGTCCTCGAGTGCAAAGGTTTCCTCGGGCCAGACGGACATTGGTCCTCGAGTGCAAAGGCAGAAGGGAGCTTGACTGCAAGACTCACCCG
TCGAGCAGAGACGAAAGTCGGCCTTAGTGATCCGACGGTGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATAACAGGCTGATCT
TCCCCAAGAGTCCACATCGACGGGAAGGTTTGGCACCTCGATGTCGGCTCTTCGCCACCTGGAGCTGTAGGTGGTTCCAAGGGTTGGGCTGTTCGCCCAT
TAATGCGGTACGTGAGCTGGGTTCAGAACGTCGTGAGACAGTTCGGTCCATATCCGGTGTGGGCGTTAGAGCATTGAGAGGACCTTTCCCTAGTACGAGA
GGACCGGGAAGGACGCACCTCTGGTGTACCAGTTATCGTGCCTACGGTAAACGCTGGGTAGCCAAGTGTGGAGAGGATAACTGCTGAAAGCATATAAGTA
GTAAGCCCACCCCAAGATGAGTGCTCTCTCCTCCGACTTCCCTAGAGCCTCCGGTAGCACAGCCGAGACAGCGACGGGTTCTCCACCCATACGGGGATGG
AGCGACAGAAGTATGGAAATAGGATAAGGTAGCGGCGAGACGAGCCGTTTAAATAGGTGTCAAGTGGAAGTGCAGTGATGTATGCAGCTGAGGCATCCTA
ACGAACGAACGATTTGAACCTTGTTCCTACACGACCTGATCAAATCGATCAGGCACTTGCCATCTATCTTCATTGTTCAACTCTTTGATGAAAAGAAAAG
ATGAAAAAACCAAAAAAAAGCTCTGCCCTTCC