Detailed information on CNT30459519


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30595662Saccharum spontaneumOryza meridionalis38.3313.596.52115reverse complement
CNT30100373Saccharum spontaneumOryza rufipogon37.3316.1895.54112forward

Expression of CNT30459519

Peptides detected in this lncRNA

>peptide 1 (53 aa)
AIAVCARERRGECWRGRRGWRTRTCRRGCRPRRPRRPPARSTSSTSPTAAVDE*

>peptide 2 (52 aa)
SHSSVCEGEKRRMLEGKARVEDTDMPARMQAAATTAASRALDLFDVADCRGG*

>peptide 3 (45 aa)
MIEDLLLALQEFDKRYGVGWQCVVGANFGCFFTHTSGTFIYFSLER

Sequence

>CNT30459519
TAGCCATAGCAGTGTGTGCGAGGGAGAGAAGAGGAGAATGTTGGAGGGGAAGGCGCGGGTGGAGGACACGGACATGCCGGCGCGGATGCAGGCCGCGGCG
ACCACGGCGGCCTCCCGCGCGCTCGACCTCTTCGACGTCGCCGACTGCCGCGGTGGATGAATGATTGAAGATCTCCTGCTTGCGCTGCAGGAGTTCGACA
AGCGGTACGGCGTGGGGTGGCAGTGCGTGGTGGGCGCCAACTTCGGGTGCTTCTTCACCCACACCAGCGGCACCTTCATCTACTTCTCCCTCGAGCGCCT