« Back to Saccharum spontaneum search


Detailed information on CNT30459211


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9ZVR7|PSKR1_ARATH, E-value = 2e-31

BLAST vs NONCODE:
NONORUT002669, E-value = 6e-55

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30552862Saccharum spontaneumOryza glaberrima21.9729.8183.3396forward
CNT30339867Saccharum spontaneumEragrostis tef51.268.8879.91224forward

Expression of CNT30459211

Sequence

>CNT30459211
TAATGCTGTAGGAATTTCCCCAGTCAGACTGTTATTTGATATTTCGAGATAGAACAGGAAGTTTAGGCTGCTGATCCAGTCAGGAATCGGCCCAGTTAGT
TGATTGTCATCTAAAAATAACATCTGCAAATTTGTTAGCTTTGATAACCAATAAGGTATTTTCCCCAACAATGAGCATGCACTTAAGGAAAGAACCTGAA
GATTCTCAAAACCATCAATGCTTTCATCATCTGGCATGGTCTCGTTCATGAAGTTGCGCCCAATAAGAAGGGTGGTGAGGTTTTTGGAGCTCTTTAGTAT
CTGAAGTGCATTTGCCAAATTCGTAAAACTGTTGCCAGCAAGAGAAAGGAACGAGAGTGACTTCAGATTGCCTAGTCCCTTTGATAACTGGCCTTGGAAA
TTATTACAAGATAGACGCAGCGCTGTTAGTTTGTGGC