Detailed information on CNT3045914


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30373911Prunus dulcisArabidopsis thaliana55.5257.1982.46171reverse complement
CNT3084328Prunus dulcisVigna radiata29.8730.2685.8792forward
CNT3059713Prunus dulcisArabidopsis lyrata57.1457.3382.95176forward
CNT30612441Prunus dulcisArabis alpina55.5255.5284.21171reverse complement
CNT30654007Prunus dulcisRosa chinensis82.1481.8883.79253forward
CNT30714740Prunus dulcisMalus domestica golden81.4981.4987.25251forward
CNT30155059Prunus dulcisPrunus persica100100.3397.73308forward
CNT30408305Prunus dulcisPapaver somniferum22.7324.2291.4370reverse complement

Expression of CNT3045914

Peptides detected in this lncRNA

>peptide 1 (62 aa)
PSFVTQACNPSGGFEVLEHWLSISWSGSGWLFTGPPIPSQELNPVARAKALGYLVSRAEGTA*

Sequence

>CNT3045914
GCCGAGCTTTGTAACGCAAGCTTGTAACCCGAGTGGGGGCTTTGAGGTGCTGGAACATTGGCTCAGTATTAGCTGGTCGGGTTCGGGTTGGCTATTTACT
GGCCCGCCCATTCCAAGCCAGGAGTTGAACCCTGTGGCTCGAGCGAAGGCTCTGGGTTACTTGGTTTCTAGAGCGGAGGGAACCGCGTAAGGCTGGCTTC
ACAGAGCAACGACTACCTCCCGCTCTTGGCAGTGGAAGGATAACGGGTCGGTGGTCACTTGGATCCCATCATGGCTCGCTAGACTGTCCCAATTGAACCA
AAACCTTT