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Detailed information on CNT30458753


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9C7S5|PSYR1_ARATH, E-value = 2e-08

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30519803Saccharum spontaneumSetaria italica29.2810.0289.3694forward

Expression of CNT30458753

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MPSHLQQSVPFFHDVVRLPSCESPARNWRRELLSCSVQELAGE

Sequence

>CNT30458753
TTGAAACTGACGTCAAGCACGGTGATGCTGTTGGACAGCACCAATTCCATTGGTAGGCCACCTGACAACAAATTATAGGATAGATTGAGGCGCAACAAGT
CCGTGAGGTTACCGAGGAATGGTGAGATGAATCCCTGAAGGCTCCTAGAAGCCAAGAAAACATCTGTGACCATCTTGTCTGGACTACAGGCAATGCCTTC
CCACTTGCAGCAGTCTGTGCCATTCTTCCATGACGTGGTGAGGTTGCCGTCCTGCGAGAGCCCCGCAAGGAACTGGAGGAGGGAGTTGCTCTCCTGCTCG
GTGCAAGAGCTTGCAGGAGAG