« Back to Saccharum spontaneum search


Detailed information on CNT30458374


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT007935, E-value = 1e-60

Expression of CNT30458374

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MSNSIRSSSRVTKLMATPFLPNRPLRPMR*

>peptide 2 (77 aa)
MSTREDPDLNSLMMMSLVFWSISPCVAETVWSLLLILSVSQSTLRRVFTKMTLWVIARVSYRSHRVSSFQSSFSTLT*

>peptide 3 (79 aa)
CGQGSEARTDHPETRIIPTVKVKILQLCLSTQLAQERHIAYSLQKFRNVAYEKMNLEPSFATIRIDLTTPPKQRKVGVF*

>peptide 4 (90 aa)
MRTRLRSPDRSSRDTNYPNSESENTPVVSQHPASPGAAHSLLATKIPKCCIRENELRTILRHNSNRPYHSSKAEKSWRILTKTDFFIQKP*

Sequence

>CNT30458374
ATGCGGACAAGGCTCCGAAGCCCGGACAGATCATCCAGAGACACGAATTATCCCAACAGTGAAAGTGAAAATACTCCAGTTGTGTCTCAGCACCCAGCTA
GCCCAGGAGCGGCACATAGCCTACTCGCTACAAAAATTCCGAAATGTTGCATACGAGAAAATGAACTTAGAACCATCCTTCGCCACAATTCGAATCGACC
TTACCACTCCTCCAAAGCAGAGAAAAGTTGGCGTATTTTAACAAAAACAGACTTCTTTATCCAGAAACCTTAGCAGCCATATTATCTAGAGAACATCTAG
AGAAGGTCAGCGACGTTGGCTGGCAGCTCCTCAATGGTCACGTTGTAGAACCTCTGGATGTCAAACAGCATCCGCTCGTCGTCACGGGTGACGAAGTTGA
TGGCAACACCCTTCCTTCCAAACCGACCACTACGACCAATGCGGTGAAGATAGTTCTCGGGCTGGGTCGGCAGGTCGTAGTTGATGACAAGTGAGACCTG
CTGGACATCGATACCACGGGCAGCAGGTCAGTGGTGATGAGCACACGGGAGGACCCGGACCTGAACTCCCTCATGATGATGTCCCTAGTGTTCTGGTCCA
TATCACCGTGCGTGGCTGAGACAGTGTGGTCCCTGCTCCTCATCTTGTCTGTGAGCCAGTCCACCTTGCGGCGGGTGTTCACAAAGATGACACTCTGGGT
GATAGCCAGGGTCTCATACAGGTCACATAGAGTGTCGAGCTTCCAATCTTCCTTCTCCACATTGACATAGAATTGCTTGATACCCTCAAGGGTGAGCTCA
TCTCTCTTGACAAGAATCCTCACAGGCTTGTTCATGAACTTGCGA