Detailed information on CNT3045767


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 8e-157

BLAST vs NONCODE:
NONMEST001181, E-value = 4e-136

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30701196Prunus dulcisQuercus lobata47.1478.7385.55692forward
CNT3069553Prunus dulcisQuercus suber43.2687.8385.2635forward
CNT30406246Prunus dulcisBeta vulgaris45.2398.9684.49664forward
CNT30562225Prunus dulcisActinidia chinensis47.0777.2184.52691forward
CNT30605497Prunus dulcisGossypium raimondii4791.0384.64690forward
CNT30214147Prunus dulcisHelianthus annuus46.5384.9585.51683forward
CNT30364222Prunus dulcisSorghum bicolor46.3262.7985680forward
CNT30153579Prunus dulcisPrunus persica100.3492.9993.211473forward
CNT30706356Prunus dulcisPrunus avium41.7644.1395.11613forward
CNT3026451Prunus dulcisPopulus trichocarpa47.0775.1186.54691forward
CNT30327242Prunus dulcisAsparagus officinalis46.3268.3485.88680forward

Expression of CNT3045767

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MQNFSRRAAYYNTKQTPKSKLQLVSDSFLLFLGIHTIKHNLFLESN*

>peptide 2 (61 aa)
MSLCWSGGMPSLSWILALTLSIVSELSTSKVMVFPVRVLTKICIPPRSRSTRWRVDSFWML*

>peptide 3 (31 aa)
MVSELSTSRVIVFPVSVLTKICIPPRRRSTK*

>peptide 4 (71 aa)
MEGGLLLDVVVSEGATILKLLASEDQPLLVWGNSLLVLDLGLDIVDRVRAFNLEGDGLSGEGFHKDLHLYI*

>peptide 5 (78 aa)
MEPRIIQNSETATETKDKVKGRLLLNVVICKSPPVLQLLTSKDEPLLVRRNALLVLNLSFHIINGIRTLHLQSYRLPS*

Sequence

>CNT3045767
TGGCCAATTAAAGAGTTCGAAATATAAAATTACAGAATTTTTTTAAGAAAATAACTGTTCACTGCTCAGACAAGCATGGAACCACGCATCATTCAGAATT
CAGAAACCGCCACGGAGACGAAGGACAAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCTGCAAGAGTCCTCCCGTCCTCCAGCTGCTTACCAGCAA
AGATGAGCCTTTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTTAGCTTTCACATTATCAATGGTATCAGAACTCTCCACCTCCAGAGTTATCGT
CTTCCCAGTTAGTGTCTTGACAAAGATTTGCATACCCCCACGAAGACGAAGCACTAAGTGAAGGGTTGATTCCTTTTGGATATTGTAATCAGCTAGGGTG
CGGCCATCCTCAAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATGCCCTCTTTGTCTTGGATCTTAGCCTTGACGTTATCAATCGTGT
CGGAGCTCTCAACCTCCAAAGTGATGGTCTTTCCGGTGAGAGTCTTGACAAAGATTTGCATTCCACCGCGGAGTCGGAGCACCAGATGGAGGGTGGACTC
CTTCTGGATGTTGTAGTCAGCGAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGGGGAATTCCCTCCTTGTCTTGG
ATCTTGGCCTTGACATTGTCGATCGTGTCAGAGCTTTCAACCTCGAGGGTGATGGTCTTTCCGGTGAGGGTTTTCACAAAGATCTGCATCTGTATATATA
GAAAACAATCATGAATCAGATTTGTTTCTTGACATAAACAAAATTGCATCTTGTAATGTGATTTGTTAAAATCAGACAACAATACACAATTTTATCAACA
AAACTTATTTCACAAATATATGGAATGATTCGAAACAGTTCTCTGCCATATCTTGATTGTTAACAGCAACCAATTAACAATTTCCTGTACAATCAAATAA
CCAAACAAAAAAATTGATGCAAAATTTTTCGCGGAGAGCTGCATATTATAATACAAAGCAAACCCCAAAATCAAAATTGCAACTTGTATCTGATAGTTTT
CTATTGTTCCTTGGAATTCATACAATTAAACATAACTTGTTCCTCGAAAGTAATTGATTAAATCAGGCGAAGATTTAGGATTTCATACAGATCTAGAAGA
TTCTAACCAATTTTTGTACACAAATTGATTATTAAAAAAAAAAAAGGCATCTTGATTATTAACAACGACATAATTAAACAGTCGAACCAAAGAAAATATT
GACGAAATTAAAAACAACAAATTGGCATCTTGATCATTAACAACGATACGATTACAAAATCAAACTGAAGAAAATATTAAAGAAACAGATCAGCAACATA
GGAAATACGAACCTTGAGGGAGAGAGAGTTAAGAGAGAACTTTGATGAGACTTTGATGAGCTTCAAGT