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Detailed information on CNT30456979


BLAST search results

BLAST vs Swiss-Prot:
sp|P01053|ICI2_HORVU, E-value = 7e-20

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30286679Saccharum spontaneumTriticum aestivum29.2515.183.14172forward

Expression of CNT30456979

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MTMQKRKQTTTTLLQKSVRYRKAHSRASVACYRASLYCW

>peptide 2 (79 aa)
MRTRLGRKSSVTREPTGNTTMSASGLSLRITFLASSMLRPTTSGHDVLAPPLPGAVVTAAVELMVVVVGREINCESVGR*

Sequence

>CNT30456979
ACTGAATAAAAGATTTTATATGTAATATGGTATCATTCATAGAAAGTAAAACACACATCCGGAACCATTCGGAAGATACATGAACAGGGTACATGATAGA
TCGATCATGGCATCTTCTGAGTTATTATTTTGAGTTTACTACACATATATTATCTTTTATTCAGTTGTGGCTGGAGTAAAAGGGAGCTGGGCAACTAGCC
AACACGGGGCGTCTCAGCGACGGTGTCGACGAAGATGCGGACGCGGTTGGGCAGAAAATCATCGGTCACCCGCGAGCCGACAGGCAACACGACGATGTCG
GCGTCGGGCTTGTCCTTGAGGATCACCTTCTTGGCTTCCTCTATGCTGAGGCCAACCACCTCCGGCCACGACGTCTTGGCGCCGCCGCTCCCCGGTGCTG
TCGTCACCGCCGCCGTGGAGCTCATGGTCGTCGTCGTGGGTCGCGAGATTAACTGCGAATCAGTTGGTCGATGACAATGCAAAAAAGGAAACAGACTACT
ACTACATTATTGCAAAAAAGCGTAAGGTATAGAAAGGCACACTCACGGGCAAGTGTTGCTTGCTATCGTGCTTCTTTGTACTGCTGGT