Detailed information on CNT3045662


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30730484Prunus dulcisCorchorus capsularis11.2521.0489.78137forward
CNT30629037Prunus dulcisVigna unguiculata12.2327.6485.91149reverse complement
CNT30231593Prunus dulcisAnanas comosus13.1420.385160reverse complement

Expression of CNT3045662

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MHETMMNFLFKCTTDGELRGNYFVNGCVDWFDYCDYWFTTDFSSLFCDFRNP*

>peptide 2 (36 aa)
MDSIENGFVILIEMVLLRRILIIVSGARNIYIYIYI*

>peptide 3 (46 aa)
MKNRIPGFESVQEVRIVASLPHQHISASSSIPGIELLFDLLLCNRR*

>peptide 4 (35 aa)
MIFFFFQTKLSFRLILIKGQRFIWIFSLYIYSLNK*

>peptide 5 (63 aa)
MGVLIGLIIVIIGLPLISRAYSAILETHEPRPLTGQTFPDQPIPRTLLTLTYLSMDEKSNPRI*

Sequence

>CNT3045662
TTTTGGTAGTTCAACTGTGGAATTTCTTTGTTTCTGTATTTCCGGAATATGAGTGTGTGACTTGGTATAATTGATCCTATGGATAGTATAGAGAATGGGT
TTGTCATCTTGATAGAGATGGTTTTACTTCGACGGATATTAATTATAGTATCTGGAGCACGGAATATATATATATATATATATATATGAAATAAATTACA
AAGTATTAGAACTATGATTCATACTTAATAGTTAAACCTCATGGCCGGACTTCGAATTTTTTTTTTTCAAAGAGTTAGAGGTTATAAAAAGAATGATTTT
TTTTTTTTTTCAAACTAAACTTTCGTTTAGGCTTATTTTGATCAAAGGACAAAGGTTTATTTGGATTTTTAGTCTTTATATCTATTCATTGAATAAGTGA
TGATCCAACAGTTCTTTCTCAGGGAATTTTGGGACGTAGTTTGAAAGGGTTTTATTGAATCATCGTGGTTCTAATATGAATCTGAGGTTTTAATTAATTA
ATAGGGTCTTAACAAGATAATTCCTATCAATAATAAAGAAACCAGCAGTAAAGCCGCATTACACATAAATAACAACAAATAAAATAGGTAAATAGAAGAT
TTAAGAGACACTGACATAGAAAGTTTGGATTTTGCATTTGGAAAGTTTGAGTTGTGTCTTTTTATATTTGGGAAATTGATTTGTGGCTTTTGACATGCAT
GAGACGATGATGAATTTTCTATTTAAATGCACCACCGATGGTGAACTAAGAGGTAACTATTTTGTCAATGGGTGTGTTGATTGGTTTGATTATTGTGATT
ATTGGTTTACCACTGATTTCTCGAGCTTATTCTGCGATTTTAGAAACCCATGAACCACGGCCTTTGACGGGTCAAACATTTCCGGATCAACCCATACCCA
GAACCCTTCTTACCCTCACATACCTTTCCATGGATGAAAAATCGAATCCCAGGATTTGAATCTGTCCAAGAGGTTCGAATTGTAGCATCCTTGCCACACC
AACACATTAGCGCCTCTTCATCCATTCCAGGAATCGAATTGCTTTTTGATCTTCTTCTTTGCAACAGAAGGTAGGGCACACTCTTTGAGAAGTTTCCTCT
GGAATTGATGTGTGTTTTTTCTGGTATGAAACTGTCGAATTGATGTTGGGTTAAAGGGGGTAACGACTTCAAATCCTTGGTCTAGTCTAAACACAGTTTT
TTTTTCCTTTTCTAAAAT