Detailed information on CNT3045640


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30501219Prunus dulcisCoffea canephora30.1929.3489.2593reverse complement
CNT30272829Prunus dulcisChenopodium quinoa26.326.3890.1281forward
CNT30506943Prunus dulcisNicotiana attenuata28.2528.5289.6687forward
CNT30634223Prunus dulcisCapsicum annuum23.0524.3288.7371reverse complement
CNT30561829Prunus dulcisActinidia chinensis33.7729.1386.54104forward
CNT30587426Prunus dulcisMusa acuminata20.1320.290.3262forward
CNT30509597Prunus dulcisSolanum lycopersicum19.8121.1191.861reverse complement
CNT30154558Prunus dulcisPrunus persica99.0399.6796.07305forward
CNT30572433Prunus dulcisVitis vinifera28.2515.7986.2187reverse complement
CNT3050759Prunus dulcisCucumis sativus20.4520.5990.4863forward

Expression of CNT3045640

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MELWPRINGSGLVWLFTSLPIPSKELFHVI*

Sequence

>CNT3045640
GCCGAGCTAAGTAACGAGAGCTTGCAACTCGAGTGAGGGCATTGAGGTGATGGAACTTTGGCCCAGAATTAACGGGTCGGGTCTGGTGTGGCTCTTTACT
AGCCTGCCCATTCCAAGCAAAGAGTTGTTCCATGTGATCTGAGCGAAAGCTCTGGGCCACGTGGCTCCTAAAGGGGAGGGCACCGCGTGAGGCTGGGTTC
ACAGAGCAACGCCTACCTCCCGCTCTTTGCAGTGGAAGGATAACGGGTTGGTGCCACCTTGATCCACCGTGGCCCGGTAGACTGGTCCAAATGAACCTAA
TCCTTTCT