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Detailed information on CNT30455867


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8S8T4|UXS4_ARATH, E-value = 9e-82

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30718631Saccharum spontaneumMalus domestica golden58.4766.7280.68383forward
CNT30105598Saccharum spontaneumOryza longistaminata69.1665.7591.39453forward
CNT30550386Saccharum spontaneumOryza brachyantha41.9810092.73275forward
CNT30337932Saccharum spontaneumCynara cardunculus37.429.8883.27245forward

Expression of CNT30455867

Peptides detected in this lncRNA

>peptide 1 (82 aa)
MVSHVALAPREEVVHHDHAVAALHEPVHKVAPHEPGAARHEHPQRAPAQPQGHLAADGPAEGRVPGNGKVVESDRSGGFGRR*

Sequence

>CNT30455867
ACCTATAGGGTTGACATTGCCCCAATAAGTTTCCACCTGAGGGTGCTGGAGGGGATCACCATAGACCTCACTGGTGCTTGTAAGTAGGAACCTTGCCCCA
ATCCTCTTGGCCAATCCAAGCATGTTCAGTGTCCCAACAACATTCGATATGATGGTCTTGATGGGGTTGTACTTGTAGTGCACGGGGCTGGCTGGGCAGG
CAAGGTGGTAGATCTGGTCGACCTCGAGCAGTATGGGCTCGACGACGTCGTGACGGATCACCTCGAACCTGGGGTTCTGGAGATGGTGAGCCACGTTGCC
CTTGCGCCCCGTGAAGAAGTTGTCCACCACGATCACGCTGTCGCCGCGCTCCACGAGCCGGTCCACAAGGTGGCTCCCCACGAACCCGGCGCCGCCCGTC
ACGAGCACCCGCAGCGCGCGCCGGCGCAGCCCCAGGGGCACCTTGCCGCCGACGGACCCGCGGAAGGACGGGTGCCCGGCAACGGCAAGGTGGTTGAATC
CGACCGAAGCGGCGGGTTCGGACGGCGATGAGGTGGAGGGGGAGGAGAAGGTGAAGAGGGCGGCAGCGAAGAGCATGCCGGCGAGGGCGAAGACGGGGCG
GTGCTCGGCGGCGGCGTAGCGCGCGGCGCGGGAGAGCCAGGAGAGCGGCTTGGAG