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Detailed information on CNT30455714


BLAST search results

BLAST vs Swiss-Prot:
sp|P06671|CB22_MAIZE, E-value = 1e-131

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671996Saccharum spontaneumSetaria viridis40.2951.7892.01363forward
CNT30149365Saccharum spontaneumBrachypodium distachyon56.1679.9486.36506forward
CNT30497363Saccharum spontaneumDigitaria exilis68.3752.3490.58616forward
CNT30603457Saccharum spontaneumOryza punctata54.1650.8991.8488forward

Expression of CNT30455714

Peptides detected in this lncRNA

>peptide 1 (81 aa)
SEQSCTVCINTDIQFTAYFINQVQTMHTNTLLVQSLTQAPFTNTCTPCSTYEYVCLRYTHASMPSLTCRGRSWWRRPRRCC*

>peptide 2 (29 aa)
MAQRQWITSSSRFLAKVSGSADSPAVSQP*

>peptide 3 (43 aa)
MVMRPSPKTSLVLVAGLPTNAREVRAMVAAAMSIRSQLLLSDA*

Sequence

>CNT30455714
TCAGAACAATCATGTACAGTATGCATAAATACAGACATACAATTTACAGCATATTTTATTAATCAGGTCCAGACCATGCATACAAATACACTACTGGTAC
AATCTCTGACCCAAGCTCCCTTCACAAATACTTGTACACCCTGCAGTACATACGAATACGTATGTCTACGGTACACGCACGCAAGCATGCCCTCACTCAC
TTGCCGGGGACGAAGTTGGTGGCGTAGGCCCAGGCGTTGTTGTTGACAGGGTCGGCGAGCCCGAGTGGGTCGAAGCTGCCGCCAGGGTACAGCGGGTCGA
CCACCTCCCCGAGCGGGCCACCGGCGATACGGTACCCCTCGACGGCGCCCATGAGCACCACCTGGCACGCCCAGATGGCCAGGATGCTCTGCGCGTGGAT
CAGGCTCGGGTTGCCGAGGTAGTCAAGCCCGCCCTCGCTGAAGATCTGTGACCCGGCCTTGAACCACACGGCCTCGCCAAACTTGACGCCGTTGCGGGCG
AGGAGCTCCGGGAACACGCACCCGAGCGCGCCGAGCATGGCCCAGCGGCAGTGGATCACCTCCAGCTCGCGGTTCTTGGCGAAGGTCTCGGGGTCCGCGG
ACAGCCCAGCGGTGTCCCAGCCGTAGTCGCCGGGGAACTCGCCGGTCAGGTAGCTTGGGGGCTCGCCGGAGAACGGACCCAGGTACAGGACGCGGTCGGC
CCCGTACCAGGGGCTGCCGGACGCCGCTGGCTTGGGCTTGGCAGCAGTCTTGCGCATGGTGATGCGGCCCTCGCCGAAGACGTCCCTGGTGCTGGTCGCC
GGCTTGCCGACGAACGCGCGGGAGGTGAGAGCCATGGTGGCGGCGGCCATGTCGATCAGATCACAGCTTCTTCTGTCTGATGCTTAGCTCTGTGTTGTGT
A