Detailed information on CNT3045457


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30589541Prunus dulcisMusa acuminata7.9525.3483.74203forward
CNT30659065Prunus dulcisTriticum dicoccoides5.5625.3186.62142forward
CNT30688788Prunus dulcisTriticum urartu8.2322.1584.29210forward
CNT30153009Prunus dulcisPrunus persica25.0317.8693.43639reverse complement
CNT30150432Prunus dulcisBrachypodium distachyon5.5624.6583.8142forward

Expression of CNT3045457

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MNHPITNYRIFFSFTQFIYFYFSQSKSKKYNWVYF*

>peptide 2 (49 aa)
MITDHVECCAMFLFNVLVLVSALKVIIFCFGGFKVCMTTYRCCLEKNGE*

>peptide 3 (72 aa)
MLLMIHFFVSFETFRNNFFCSFKIIRIIKHLFFNFLNFFFSSLKMGSKNESFFLGEPKGSSVSIPKTVKMLD*

>peptide 4 (30 aa)
MKEKAWPNWMETIRVSWKKIASSSYKRTPLL

>peptide 5 (33 aa)
MSYKSPNTCLEKQKPRRGSLKVYYTKLLGCSSK*

>peptide 6 (31 aa)
MRISWHPMLELESHQDHEDYLEVNSYIISFA*

Sequence

>CNT3045457
CTCCGAAATCAATACTGTAATTAAGCAACCGTTTCTTGCGAATATCAGTTTCCAATTTCCAATCAACAACGGGTAGATCTAAAGGACATAGACGAACACA
TACTTCACAAACAATACATTTATCAAATTCAAAATGGATTCGACCGCTGAAACGCTCCGCGGTGATTAATTTTTCATAAGGATATTGAAAAGTTACAGGT
AAACGATTTGCGGAGATAAAGTAATCATTAAACTTTATCTTTTAATATCTGCCAAATATTTTTTTGTGATTCTGATCCTTTATCATCATAACTTATTTTG
TTAGAACTAAAATTTATATCTGGAGTTCCTTTTTTATTTTCTTTTGTAATTTTTTCTATTTGATTTATGATTGTATTTGTTCTATCAGTTAGATCTTGCA
TTTTTTTTTCTGTTAATGAATAATTTGTCCAACCCTGAGATATAATTTGAATCGACGATTCATGAATCATCCGATTACCAATTATCGAATCTTTTTTAGT
TTCACTCAATTCATATACTTCTATTTCTCTCAATCCAAATCCAAAAAATATAATTGGGTTTATTTTTGAGAGTTCTTTTATTATTTCTTTTATAAACAGA
ATGCTTTTAATGATCCATTTTTTTGTTTCTTTTGAGACATTTAGAAACAATTTTTTTTGTTCTTTTAAAATTATTAGAATTATAAAACATTTATTTTTCA
ATTTTTTAAATTTTTTTTTTAGTTCTTTAAAAATGGGTTCAAAAAATGAAAGTTTTTTTCTGGGAGAACCAAAGGGTAGTTCAGTTTCCATTCCAAAAAC
TGTTAAAATGTTAGATTAATCCGTAAGTCACATTATTTTGTTACAATTAAATTTATTTTCTTTTTAATGTGGCACACATAGGATTTGGTCTTGTATATAA
ATTCTTGAATGATAACAGATCATGTGGAATGTTGTGCAATGTTCCTGTTCAATGTTTTAGTTCTAGTAAGCGCATTGAAGGTTATCATTTTTTGTTTTGG
AGGTTTTAAAGTTTGCATGACAACTTACAGGTGCTGCCTTGAAAAAAATGGAGAATGAAAAGGGAATAATCGCATGAGGATTAGTTGGCACCCAATGCTC
GAATTGGAAAGCCACCAGGATCACGAGGATTATTTGGAAGTTAACAGCTACATCATTTCGTTTGCATAATAGGTAGGATAAAAGTGTACAACTCCATACC
ATTCACTTGAAGTTTATGATATGCAGAATGTGATTTTTACTAGAAAGATGGTTCTATGATATAATATTAACAATGTACTTCTATGACGTAGTATTAACAG
TGTACTTTTTTTTTCTTTTCTTGTAGAGGTATCTTGTTATTACTAGTATTCTTCCCTGCTGGGGCTGGCAAGACAATGCTGATCAGTGATGCTGAGAAAG
TTTATGCATTGGGAAAGGACTGAAGATGGTTCTATAACATAGTAATAACAAGATAGTTCTATGAGTTGAGGCCCAAAAAAGTCCTTGGTTAAGCCCAAAT
AAGTTTTCGGTCCAATATGATACTGTATTAAGAAAAGTCACATATCGGAATACACGAAGGCTCGTCATATACAAGTCAGAGTCCACATGCCATGCTAAAT
AAATAATTTGTCATGCCAAGGACTGAGATAATATTATAAAATACAAGCTCATGCTAAACTAAGCACCGTGTCCCTCTTTATGGACGATAAAATTGAAGCA
CGCCAAGCGACACGCCACGCCAAGCAAGGAATTATTATTCCGCACCCAATCACGCCACAAGCTTAAGTGGGCCCCAAGCCACTCAAATACCTAGGGCTTG
CTTGAGTGAGTTGTGGTATGGATGGTAATAAATTGTCATAAGGCCCGTTGATAGGCCGAGAAATGGAAGTCCCGGGTTGCTTGGGAGCCTCGGGACTCAA
GCCCATTTCATAGGCCCAAACATGTGGGTGAGCACAAGAGAGAAAAGAATAGCCCATCACTCCAAACAAAAATAGCCCAATCAAAATAGCCTATTGACTC
AACCAAAAAGCCCAAATGTTTGATAAAGAAATCCCACTTACTTAATGAATCACCTTTGCCCATACAATTACCATAATGAGCTATAAAAGCCCCAACACTT
GTCTGGAAAAACAAAAGCCACGAAGGGGAAGTCTGAAGGTCTATTATACAAAGTTGCTGGGATGTTCCAGCAAATGAGAAGGGAGCAAGTTTGAAGCAAA
AGACACCCAAGGGACCAAACGATATTTGCGTGCAGAGGAGAACCGCTCTTTGAACCAGCATATATGCCCATTCTCTTTCCCTCATCAGACCTAGCCATAG
AAAAAGGAAGGAAAAGGAAGGAAGAAGATGGCTGGAAATAGGAATTCTCCACAAAGGCGGCTGCGGGAAGAGCATTGAGCTCCCAAAAATCCCGGATTTT
GTGATATTGGGTAGATGGGATTTTTGCTAGATTAGGATAAGTCAAAGAAATGGAGGAGAAATGAAGGAAAAAGCTTGGCCAAATTGGATGGAAACCATTA
GGGTTTCTTGGAAAAAGATAGCTTCTAGCAGCTATAAAAGGACGCCTCTTCTA