Detailed information on CNT30454559


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30130961Saccharum spontaneumLolium perenne29.4126.8686.1565forward

Expression of CNT30454559

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MGAAWRGRRRRWRLCLRRGRGLGFCGRWRGRWWRRWPPPFQRSRGG

>peptide 2 (57 aa)
SSWPARDTFSFLKTEVSKSSDGMAARWHGGCVAGKETEVAAVPAEGAGFRVLRAMAR*

>peptide 3 (49 aa)
LLMAGQGHLFLLEDGGLEVERRHGGEVAWGLRGGEGDGGGGCACGGGGV*

Sequence

>CNT30454559
CTCCTCATGGCCGGCCAGGGACACCTTTTCCTTCTTGAAGACGGAGGTCTCGAAGTCGAGCGACGGCATGGCGGCGAGGTGGCATGGGGGCTGCGTGGCG
GGGAAGGAGACGGAGGTGGCGGCTGTGCCTGCGGAGGGGGCGGGGTTTAGGGTTTTGCGGGCGATGGCGAGGTAGGTGGTGGAGGAGGTGGCCGCCGCCA
TTTCAGAGGAGCAGAGGGGGC