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Detailed information on CNT30454417


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8S8T4|UXS4_ARATH, E-value = 2e-80

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30339698Saccharum spontaneumEragrostis tef51.3432.5587.31402forward
CNT30363710Saccharum spontaneumSorghum bicolor29.1238.8498.25228forward
CNT30574680Saccharum spontaneumOryza barthii48.1541.1690.98377forward
CNT30115589Saccharum spontaneumOryza nivara48.1526.4290.98377forward
CNT30603506Saccharum spontaneumOryza punctata48.7976.193.19382forward

Expression of CNT30454417

Peptides detected in this lncRNA

>peptide 1 (82 aa)
MVSHVALAPREEVVHHDHAVAALHEPVHKVAPHEPGAARHEHPQRAPAQPQGHLAADGLAEGRVPGNGKVVESDRSGGFGRR*

Sequence

>CNT30454417
ATTCCTGTACTTTCCACTAATCTCCTATGATCGACTGAATCGATCTGTTTGACGGAACTATTGCATTACAGAATTCACAAAAAATAATATTATGAAGAAG
AGTTGTTACCTATAGGGTTGACATTGCCCCAATAAGTTTCCACCTGAGGGTGCTGGAGGGGATCACCATAGACCTCACTGGTGCTTGTAAGTAGGAACCT
TGCCCCAATCCTCTTGGCCAATCCAAGCATGTTCAGTGTCCCAACAACATTCGATATGATGGTCTTGATGGGGTTGTACTTGTAGTGCACGGGGCTGGCT
GGGCAGGCAAGGTGGTAGATCTGGTCGACCTCGAGCAGTATGGGCTCGACGACGTCGTGGCGGATCACCTCGAACCTGGGGTTCTGCAGATGGTGAGCCA
CGTTGCCCTTGCGCCCCGTGAAGAAGTTGTCCACCACGATCACGCTGTCGCCGCGCTCCACGAGCCGGTCCACAAGGTGGCTCCCCACGAACCCGGCGCC
GCCCGTCACGAGCACCCGCAGCGCGCGCCGGCGCAGCCCCAGGGGCACCTTGCCGCCGACGGACTCGCGGAAGGACGGGTGCCCGGCAACGGCAAGGTGG
TTGAATCCGACCGAAGCGGCGGGTTCGGACGGCGATGAGGTGGAGGGGGAGGAGAAGGTGAAGAGGGCGGCAGCGAAGAGCATGCCGGCGAGGGCGAAGA
CGGGGCGGTGCTCGGCGGCGGCGTAGCGCGCGGCGCGGGAGAGCCAGGAGAGCGGCTTGGAGGGCTTCGGGGAGTACTCCCCG