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Detailed information on CNT30454015


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9S7M0|CB3_ARATH, E-value = 2e-121

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30556448Saccharum spontaneumPanicum hallii62.5884.7994.85485forward

Expression of CNT30454015

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MQPSAPSIAHRPWITSSALFRANASGSADSPAVSQP*

>peptide 2 (58 aa)
MAWTKKPNMENMARRPFLISLTLSSAKVTGSSARPMRMTWNPSTARMLCACTRLGLPR*

Sequence

>CNT30454015
AAGAAAAATAGTAGACACAACTACATATATGGACACATCACACACCGAATCAGTTAACAACTAAAACGGAGCAGATGGAATTGAAGACCAAAACTAGTCC
AGTACGTTTCTGAGTTCTGAGAGAGCACAAGGATATTTGCATTCGTTCATGGTACAAATGTAATGTCACAACACAAACGAGTAGTCTACAATGTCCCGGC
ACGCCGCCGTGTCCGGCTAGCTTAAGACCCTGGCGCGAACTTGGTGGCGTAGACCCAGGCGTTGTTGGCGACGGGGTCGTCGAGGTGGTCGAGCAGGTTC
TCGAGGGGCCCCTTGCCGGTGACGATGGCCTGGACGAAGAAGCCGAACATGGAGAACATGGCGAGGCGGCCGTTCTTGATCTCCTTGACCTTGAGCTCGG
CGAAGGTGACGGGGTCGTCGGCGAGGCCCATGAGGATGACCTGGAACCCCAGCACGGCGAGGATGCTCTGCGCGTGCACCAGGTTGGGGTTGCCGAGGTA
GTCCAGCCCGCCCTCGGAGAAGATCTGCGCGCCGGCCTTGAACCACACGGGCTCCTTGAAGTCCACGCGCACCCACTTCTCGAGCACCTCCGGGGTGATG
CAGCCCAGCGCCCCCAGCATCGCCCACCGCCCGTGGATCACCTCCAGCGCCCTGTTCCGCGCGAACGCCTCCGGGTCCGCCGACAGCCCGGCGGTGTCCC
AGCCGTAGTCGCCGGGGAACTCGCCGGTGAGGTAGGACGGCGTCTGCGCGGAGAAGGGGCCCAGGTACTTGACGC