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Detailed information on CNT30453892


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30367085Saccharum spontaneumSorghum bicolor45.6755.5391.94211forward

Expression of CNT30453892

Peptides detected in this lncRNA

>peptide 1 (51 aa)
MHGAEDEDEHSTNNNIEGASLRSKTQMGNNNKHEHTDTTTTTNNKINPALD*

Sequence

>CNT30453892
TTCAGAAGAGAACAATCATTTGCAGCACCAAGAAGCACCTTTTTTTCATTGATTGACTGATGATTAACAACTTGCCATCGATCCCAGGCCCAGCTCATGC
TGATTGATGCACGGGGCCGAAGACGAGGACGAACACAGCACTAACAACAACATCGAAGGAGCGAGCTTGCGATCAAAAACACAGATGGGCAACAACAACA
AACACGAACACACAGACACGACGACAACGACGAACAACAAGATAAACCCCGCTCTGGACTAGGGTAACACAGCAACACGGTAGCAGTAGCGAACAAGATA
ACTTGGCCGCGCGGGCCCCACCGCTCAGTTCCTCCAGTTCCCCTCGGAGTTGCCGTACCCGCCGCCGCGGCTGCCACCGCCGTAGCCGCGAGGCCGCCGA
CGAAGCAGCGGTACTCAACGTCCGATGCCGCCATCTCTTCCGCTCACCCACGAACCCGAACC