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Detailed information on CNT30453230


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3013315Saccharum spontaneumZea mays5.7522.4997.3776forward

Expression of CNT30453230

Peptides detected in this lncRNA

>peptide 1 (70 aa)
MRGSSELYLRRARTRSDLSLPRSNSLETVAGGRWIGGGFGCGRGAGERMRWLVGVLVGRGGGKGARGALL*

>peptide 2 (53 aa)
MKKLAEPNSHSKNRWHWWVDLLSRNLLAQVRCRKRTPLGYQPTSNTKTKPKKK*

Sequence

>CNT30453230
CTCCTCCGGGAACCCAACCCTAAATAACATAAGAGATCTACAACTGACTGACCGGTGACAGCAACAAAAACGAATTGAACATCTACACAAAACGAACGAA
CGGGATTAGCACTAATAATCCACTAGTGCCCGCGCAGGATGTCTAAAATCCCATCTGCGCGACGGCCGTTAACCTTAACCCTCTGCTGCAGCCTGCAGTA
GTCGTCGGAAGGAGCCAAGAAGAACAACAATGTCGGTCGGTGGTTAATTGGCGGCGAGGAGGGAGTCCCAGTCGATCTCGTACGACGGGTACTTGGTGAG
CGCGAAGCCGGCGGCCTCGTCCCACGGCGCCTCGCTGAAGTCCAGCTGCTGCATCTCCGGCACCGTCGACGACTCGGGGGAGGCGGACGGCGACGGGGAC
GGGCACGAGGACTCGGCGGCGGACTCGAGGCAGGACGAGGACGCGTCGTCGGAGGACGGCGAGGAGGAGCAGTTGCTGGTGGGGGCGGACGACGACGTGG
CAGCTGCTGCGGCGGCGGAGGCGGAGGCGGAGGCGGGCCTGGATGTACTGCATCTGGGCTGGGCTCAGCTGGCCCGCCCCCTCGGCCGCGGCGGCGAACG
GGTACCCGCCGTAGGCGGCTGCGGCGGCGACTTGGTGGAAGGAGAACGGCGACGAGGGACTGAGAGGCTGGTGGGGTGGAGGAGCGGACTGGATCCGTGA
GGAGCAGAGGAGGCATCCTGGATAAAAGGCTCGAGTGCTCTCATCAGCTCCTCCCCTGACAGATCTATAGCGGCGGCCATCTAGACTGTTTTTTTTGTTT
TTTTTTCTCTAGCAAACCAAGAACAAAATGAAGAAACTGGCAGAACCCAACAGCCACAGTAAAAACAGATGGCACTGGTGGGTAGATCTGCTCAGCAGGA
ACTTACTTGCACAAGTGAGGTGTAGAAAAAGAACCCCTCTTGGCTACCAACCTACTAGCAATACTAAAACCAAACCGAAGAAGAAATAGCAGATCTGAAG
CCCAGGATCTAAAAGGCCCCGGGTCTCTCGCTGTCTGCTCGAGGAAGACGAAACCAAAGCAAGGAGATGAGATTAGCAGGAGGGGATGAGAGGGTCGAGT
GAACTTTACCTGCGACGCGCGAGAACTCGCTCAGATCTAAGCTTACCTCGCTCAAACTCACTGGAAACCGTGGCGGGTGGGCGCTGGATCGGAGGCGGAT
TTGGCTGTGGACGGGGTGCGGGTGAGCGGATGCGATGGCTGGTGGGAGTGTTGGTGGGGCGGGGAGGAGGAAAGGGGGCGCGAGGAGCTCTTTTATAGCG
ACGCGGCGTCACCGCATTTGAT