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Detailed information on CNT30452171


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30362631Saccharum spontaneumSorghum bicolor55.0735.0490.56445forward

Expression of CNT30452171

Peptides detected in this lncRNA

>peptide 1 (98 aa)
MLTPASARDQHLCFSTSCHSAIHPKASRRGFDSLMFFLISWMIWKERNDRTFGRQATPALQLVHKIVEEANDWIGAGYRHLLSPIGGWMILTTVSVFV*

>peptide 2 (37 aa)
MTEPLDARPHRRYNWCTKSWRKPTTGSGQDIGIYCRQ*

>peptide 3 (35 aa)
MLLGVSSLSTDFLLVVDHSKKRLSLLASHFAFRCS*

Sequence

>CNT30452171
TGTCAGTTCTTTTTTAAAGCTTGTATTTGGTGGCCTAATAATTGATCAGCCAACTAAATAACTTTCTATCTTCAGCTTGATGGTCACTGCTTGCTGACTG
GTTTCAGACTGTTGGGTGCTCCAAGGGCAGCAATAGGGCTTGTCTAGAAAGTGAGGTACAGACGTAAGACAACCTCCCATTCCTGATCAGGTATCACTCG
AGTGTGTAGGTTTTCCGGAATGCAGCCAATGCATCAGTTGTTAGACAGTGTCTTTGAAGCCAATGCTGCTAGGAGTTTCTAGTTTATCAACAGATTTCCT
CTTAGTTGTTGATCACAGCAAGAAACGGCTGTCCTTGCTAGCTAGTCATTTCGCTTTTAGGTGTTCGTAGGCAGGAAAAGCATGTCTCTGACCAAACATG
ACAAATCGCTTGGAGTGATGATTAGCGGAGAGGTAAGGTAAAGGTATATGCTCACTCCAGCCAGTGCCAGAGATCAGCACCTATGTTTCTCTACGAGCTG
CCATTCTGCCATTCACCCCAAGGCGTCGCGAAGGGGTTTCGATTCATTAATGTTCTTTCTCATTAGTTGGATGATCTGGAAAGAACGCAATGACAGAACC
TTTGGACGCCAGGCCACACCGGCGCTACAACTGGTGCACAAAATCGTGGAGGAAGCCAACGACTGGATCGGGGCAGGATATAGGCATCTACTGTCGCCAA
TAGGGGGTTGGATGATACTCACCACAGTAAGTGTTTTTGTTTGAGTTTTGGGCTCTGCTGCAGGTCGCAAACTAGTTCTGTGTAATAGGAAGTTAGTTTT
CTGGATGA