Detailed information on CNT304520


BLAST search results

BLAST vs Swiss-Prot:
sp|O48814|BIK1_ARATH, E-value = 4e-27

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30389742Zea maysTriticum turgidum27.3115.1288.71124forward
CNT30369284Zea maysOryza glumipatula10.5723.393.7548forward

Expression of CNT304520

Peptides detected in this lncRNA

>peptide 1 (29 aa)
LSRTCSSDGLAMSMARRPVMSSSSTTPKL*

Sequence

>CNT304520
TTAAGTAGGACCTGCTCCTCGGACGGCCTGGCCATGTCGATGGCGCGGCGGCCGGTGATGAGCTCGAGCAGCACGACGCCGAAGCTGTAGATGTCCGACA
TCTTGGTGAGCTTGCCGAAGTCGGAGAGCTTGGCGTTGAAGTCCGCGTCCAGGAGGATGTTGGAGTCGGTGCTGTAGCCCAGCAGCTTGACGAGGTTCGG
GTGGTGCAGGAGGCTGAGCATCAGCACCTCGACGAGGAACTCGCCGTTGCCCTGGAGCCCGTCCCTGTTCAGCTGCTTCACGGCGATAACCTCTCCGGTG
TCCTCGAGGAGCCCTTTGTACACCCGTCCAAAGCCGCCTTCTCCGAGCAGGTTCTGCGAACTGAACCCGTCCGTTGCGGCGCTCAGCTGACTGAACGTCA
GCGCCCTGCTGGGCATGTTTTGGTTGCTAACCCCTAGGCTCTCCTCTGCATGCG