« Back to Saccharum spontaneum search


Detailed information on CNT30451841


BLAST search results

BLAST vs Swiss-Prot:
sp|Q945T0|RALF_TOBAC, E-value = 2e-20

BLAST vs NONCODE: nothing found

Expression of CNT30451841

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MEQKREQRKPGLALQSPDHGHSISWPVQAASSKANSESVLWSSN*

>peptide 2 (31 aa)
GFKTRTHVNLILPCSWWWCAGALLHSCKQCR*

>peptide 3 (28 aa)
MACAGGGGGAEGALGNGGEEGGRQRAREL

>peptide 4 (80 aa)
MFVVVVCWGTPPFLQAMQVRWNRRESRGSQDWHSRVQTMAIPFHGQYRRQAAKQILNLFYGVVTKKRTCSNQPIKSILLC*

Sequence

>CNT30451841
TGGATTCAAAACAAGGACGCATGTTAACTTGATCCTTCCATGTTCGTGGTGGTGGTGTGCTGGGGCACTCCTCCATTCCTGCAAGCAATGCAGGTGAGAT
GGAACAGAAGAGAGAGCAGAGGAAGCCAGGATTGGCACTCCAGAGTCCAGACCATGGCCATTCCATTTCATGGCCAGTACAGGCGGCAAGCAGCAAAGCA
AATTCTGAATCTGTTTTATGGAGTAGTAACTAAGAAGAGGACATGCAGCAACCAACCAATCAAGAGTATACTCCTATGTTGATAAGCACTGTGTTAAGCA
GGCACAGGTAGGGGCAGGGCATGAATCCATCTCCCTCCCCTTAACTTCACAACAAATTGTCAAATTCCATAGCTCTAGTACTTGTAAACGGCACGGCAGC
CGGCAGCAGCGGTAGTAGCGGTGGGCAGTCGGGGTCGGGCGGATCCGGCGCGTCAGCCTCAGCCGCGGCAGCGGGTGATGCGGGAGCAGCCGCGGTGGTA
GGGGTTGGCCTGCGCGCCGGGGCGGCAGTTGTAGTAGCTGGCGCCGCGGCGGGAGCAGGGCACGTTGCCCCGCCGGAGAGCGCGGTAGCTGATGTACCCG
CCGCCGTAGAGCGCGCGGCGGTGGGACTCGGCGGAGGCGGACGCCCCCAGGTCCAGGGCGGACTCCTCGGCGAGGCACTCGCCCACCGTGCCGCCGCGGC
ACTCCCTCCGGCCCCGGGCCCCCGAGGAGAGGAAGCCCAGGTCCAGGTCCAGGCCCAGGTGGCTCCCGCCGGCGGACGCCGCCACGGCCAGCAGCAGGAG
GAGGGCCAGCGCGAGCCTAGCCATGGCGTGTGCAGGCGGCGGCGGCGGCGCGGAAGGCGCGTTGGGGAACGGGGGAGAGGAGGGAGGGAGGCAGAGAGCC
CGTGAGCTGTC