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Detailed information on CNT30451727


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LH82|AATP7_ARATH, E-value = 1e-28

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30688618Saccharum spontaneumTriticum urartu22.685.9585.45110forward
CNT30362011Saccharum spontaneumSorghum bicolor44.3334.4684.19215forward

Expression of CNT30451727

Peptides detected in this lncRNA

>peptide 1 (33 aa)
YIYMVCLDCLKLAISSNFILNSEYWLFKVWQTK*

>peptide 2 (30 aa)
MFSATSAGVMSTSRSSAATAPKRGWSSTSR*

Sequence

>CNT30451727
TATATATATATGGTCTGTTTGGATTGCTTAAAACTAGCTATTAGTTCAAACTTCATACTGAATTCTGAATATTGGTTATTTAAAGTTTGGCAAACTAAGT
GATCGACACCCACCAGCCTACTCCTCCTCCTCGTCGACCTCATCGGCGGCGCCGGCCTCCTTCTTCTTCCGCTCGGCCTTTTTCTTCTTCGCCATCAGCG
CGTCCTCCTTGGCCTTCTCCAGCGCCTCCACCAGCGCTGCGAGGCACGAGTCGGCGTCCTCGCCGGGCGCCTTGGGCGTCATGTTCTCAGCGACGTCGGC
GGGCGTCATGTCCACCTCCCGCAGCAGCGCCGCCACGGCGCCGAAGCGTGGGTGGTCGTCCACGTCGAGGTAGACCTTGGCGAGGAACTTGAAGGACTCG
ACGCAGCAGTAGGACATCTCCACGTGCTTGTCCATGCGGCCGCGTCGGATCAACGCCGGGTCCAGCTTCTCCACGTGGTTGGTGG