Detailed information on CNT3045137


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9AU11|PKS1_RUBID, E-value = 2e-43

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30573603Prunus dulcisVitis vinifera22.913.9992.3152forward

Expression of CNT3045137

Peptides detected in this lncRNA

>peptide 1 (53 aa)
TKDQMGNFGLGLAPFLNGLGGSFFAEFWNFNNHHVLPGIKGRGHVLTHSWVLF*

>peptide 2 (62 aa)
VQKTKWVILDLGWPHSLMALVAASLPSFGISTTTMSCLASREGAMYSHIVGFSFRISSVKYM*

Sequence

>CNT3045137
GTACAAAAGACCAAATGGGTAATTTTGGACTTGGGCTGGCCCCATTCCTTAATGGCCTTGGTGGCAGCTTCTTTGCCGAGTTTTGGAATTTCAACAACCA
CCATGTCCTGCCTGGCATCAAGGGAAGGGGCCATGTACTCACACATAGTTGGGTTCTCTTTTAGAATTTCTTCAGTCAAGTACATGTAACGCTTCTTGAT
CATAGATTTGTCACCTGAAAAAAGCAT